DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1304 and F12

DIOPT Version :10

Sequence 1:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_000496.2 Gene:F12 / 2161 HGNCID:3530 Length:615 Species:Homo sapiens


Alignment Length:294 Identity:87/294 - (29%)
Similarity:132/294 - (44%) Gaps:69/294 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 PVHSAPGSL------------NG----------------RVVGGEDAVKNQFPHQVSLRNAGSHS 56
            |....||:|            ||                |||||..|::...|:..:|  ...||
Human   333 PQSQTPGALPAKREQPPSLTRNGPLSCGQRLRKSLSSMTRVVGGLVALRGAHPYIAAL--YWGHS 395

  Fly    57 -CGGSILSRNYVLTAAHCVTNQDSNGNSVPIAAERFTIRAGSNDRFSGGVLVQ---VAEVIVHEE 117
             |.||:::..:|||||||:.::.        |.|..|:..|...|.......|   |....:||.
Human   396 FCAGSLIAPCWVLTAAHCLQDRP--------APEDLTVVLGQERRNHSCEPCQTLAVRSYRLHEA 452

  Fly   118 YG--NFLNDVALLRLE-----SPLILSASIQPIDLPT-ADTPADVDVI-ISGWGRIKHQ----GD 169
            :.  ::.:|:|||||:     |..:||..:||:.||: |..|::..:. ::|||   ||    .:
Human   453 FSPVSYQHDLALLRLQEDADGSCALLSPYVQPVCLPSGAARPSETTLCQVAGWG---HQFEGAEE 514

  Fly   170 LPRYLQYNTLKSISLERCD--ELIGWGV-QSELCL-IHEADNGACNGDSGGPAVYNNQV----VG 226
            ...:||...:..:|||||.  ::.|..: ...||. ..|....||.||||||.|..:|.    :.
Human   515 YASFLQEAQVPFLSLERCSAPDVHGSSILPGMLCAGFLEGGTDACQGDSGGPLVCEDQAAERRLT 579

  Fly   227 VAGFV-W-SACG-TSYPDGYARVYYHNEWIKNNS 257
            :.|.: | |.|| .:.|..|..|.|:..||:.::
Human   580 LQGIISWGSGCGDRNKPGVYTDVAYYLAWIREHT 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1304NP_608418.1 Tryp_SPc 32..256 CDD:238113 80/251 (32%)
F12NP_000496.2 FN2 41..88 CDD:128373
EGF_CA 96..131 CDD:238011
FN1 133..173 CDD:238018
EGF 178..206 CDD:394967
Kringle 217..295 CDD:395005
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 298..359 6/25 (24%)
Tryp_SPc 373..612 CDD:238113 80/251 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.