DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1304 and Prtn3

DIOPT Version :9

Sequence 1:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_035308.2 Gene:Prtn3 / 19152 MGIID:893580 Length:254 Species:Mus musculus


Alignment Length:268 Identity:85/268 - (31%)
Similarity:124/268 - (46%) Gaps:42/268 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLGSF--------LLLLAVPVHSAPGSLNGRVVGGEDAVKNQFPHQVSL---RNAGSHSCGGSIL 62
            :.||:        .||||:.|..|..:  .::|||.:|..:..|:..||   |..|||.|||:::
Mouse     1 MAGSYPSPKGIHPFLLLALVVGGAVQA--SKIVGGHEARPHSRPYVASLQLSRFPGSHFCGGTLI 63

  Fly    63 SRNYVLTAAHCVTNQDSNGNSVPIAAERFTIRAGSNDRFSGG------VLVQVAEVIVHEEYGNF 121
            ...:|||||||:  ||       |:.:..|:..|::|..|..      .:.||.:...:.|..  
Mouse    64 HPRFVLTAAHCL--QD-------ISWQLVTVVLGAHDLLSSEPEQQKFTISQVFQNNYNPEEN-- 117

  Fly   122 LNDVALLRLESPLILSASIQPIDLPTADTPAD--VDVIISGWGRIKHQGDLPRYLQYNTLKSISL 184
            ||||.||:|.....|...:....||..|....  ...:..||||:..|...||.||...:..::.
Mouse   118 LNDVLLLQLNRTASLGKEVAVASLPQQDQTLSQGTQCLAMGWGRLGTQAPTPRVLQELNVTVVTF 182

  Fly   185 ERCDELIGWGVQSELC-LIHEADNGACNGDSGGPAVYNNQVVGVAGFVWSACGT-SYPDGYARVY 247
             .|.|       ..:| |:.....|.|.||||||.:.|..:.||..||...|.: .:||.:|||.
Mouse   183 -LCRE-------HNVCTLVPRRAAGICFGDSGGPLICNGILHGVDSFVIRECASLQFPDFFARVS 239

  Fly   248 YHNEWIKN 255
            .:.:||:|
Mouse   240 MYVDWIQN 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1304NP_608418.1 Tryp_SPc 31..253 CDD:214473 74/234 (32%)
Tryp_SPc 32..256 CDD:238113 77/237 (32%)
Prtn3NP_035308.2 Tryp_SPc 29..245 CDD:214473 74/234 (32%)
Tryp_SPc 30..248 CDD:238113 77/237 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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