DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1304 and Tmprss2

DIOPT Version :10

Sequence 1:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster
Sequence 2:XP_008766769.1 Gene:Tmprss2 / 156435 RGDID:620766 Length:580 Species:Rattus norvegicus


Alignment Length:241 Identity:77/241 - (31%)
Similarity:114/241 - (47%) Gaps:29/241 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILSRNYVLTAAHCVTNQDSNGNSVPIAAERF-TIR 94
            |:|||..|....:|.||||...|.|.|||||::..:::||||||..        |:::.|: |..
  Rat   253 RIVGGSTASPGDWPWQVSLHVQGIHVCGGSIITPEWIVTAAHCVEE--------PLSSPRYWTAF 309

  Fly    95 AG--SNDRFSGGVLVQVAEVIVHEEYGNFL--NDVALLRLESPLILSASIQPIDLPTADTPADV- 154
            ||  .......|...||.:||.|..|.:..  ||:||::|::||..:..::|:.||......|: 
  Rat   310 AGILKQSLMFYGSRHQVEKVISHPNYDSKTKNNDIALMKLQTPLAFNDVVKPVCLPNPGMMLDLA 374

  Fly   155 -DVIISGWGRIKHQGDLPRYLQYNTLKSISLERC------DELIGWGVQSELCL-IHEADNGACN 211
             :..|||||....:|.....|....:..|...:|      :.||   ..:.:|. ..:....:|.
  Rat   375 QECWISGWGATYEKGKTSDVLNAAMVPLIEPSKCNSKYIYNNLI---TPAMICAGFLQGSVDSCQ 436

  Fly   212 GDSGGPAV-YNNQVVGVAGFV-W-SACGTSY-PDGYARVYYHNEWI 253
            ||||||.| ..|::..:.|.. | |.|..:| |..|..|....:||
  Rat   437 GDSGGPLVTLKNEIWWLIGDTSWGSGCAKAYRPGVYGNVTVFTDWI 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1304NP_608418.1 Tryp_SPc 32..256 CDD:238113 76/240 (32%)
Tmprss2XP_008766769.1 LDLa 112..147 CDD:238060
SRCR_2 152..247 CDD:464747
Tryp_SPc 254..485 CDD:238113 76/240 (32%)
Blue background indicates that the domain is not in the aligned region.

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