DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1304 and Hpn

DIOPT Version :10

Sequence 1:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_001263198.1 Gene:Hpn / 15451 MGIID:1196620 Length:445 Species:Mus musculus


Alignment Length:258 Identity:90/258 - (34%)
Similarity:123/258 - (47%) Gaps:40/258 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILSRNYVLTAAHCVTNQDSNGNSVPIAAERFTIRA 95
            |:|||:|:...::|.|||||..|:|.||||:||.::|||||||...::.       ...|:.:.|
Mouse   190 RIVGGQDSSLGRWPWQVSLRYDGTHLCGGSLLSGDWVLTAAHCFPERNR-------VLSRWRVFA 247

  Fly    96 GSNDRFS-GGVLVQVAEVIVHEEYGNF--------LNDVALLRLESPLILSASIQPIDLPTADTP 151
            |:..|.| ..|.:.|..||.|..|..|        .||:||:.|.|.|.|:..|||:.||.|. .
Mouse   248 GAVARTSPHAVQLGVQAVIYHGGYLPFRDPTIDENSNDIALVHLSSSLPLTEYIQPVCLPAAG-Q 311

  Fly   152 ADVD---VIISGWGRIKHQGDLPRYLQYNTLKSISLERCDELIGWGVQSE---LCLIH-EADNGA 209
            |.||   ..::|||..:..|.....||...:..||.|.|:....:|.|.:   .|..: |....|
Mouse   312 ALVDGKVCTVTGWGNTQFYGQQAMVLQEARVPIISNEVCNSPDFYGNQIKPKMFCAGYPEGGIDA 376

  Fly   210 CNGDSGGPAVYNNQVVGVAGFVWSACG----------TSYPDGYARVYYHNEW----IKNNSD 258
            |.||||||.|..:.:.|.:.  |..||          ...|..|.:|....||    ||.:|:
Mouse   377 CQGDSGGPFVCEDSISGTSR--WRLCGIVSWGTGCALARKPGVYTKVTDFREWIFKAIKTHSE 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1304NP_608418.1 Tryp_SPc 32..256 CDD:238113 88/253 (35%)
HpnNP_001263198.1 Hepsin-SRCR 79..187 CDD:462736
Tryp_SPc 191..428 CDD:238113 85/246 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.