DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1304 and Prss48

DIOPT Version :10

Sequence 1:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_001420265.1 Gene:Prss48 / 108350052 RGDID:11436036 Length:308 Species:Rattus norvegicus


Alignment Length:260 Identity:82/260 - (31%)
Similarity:130/260 - (50%) Gaps:44/260 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 PVHSAPGSLNGRVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILSRNYVLTAAHCVTNQDSNGNSV 84
            ||:|      ||:|||:.|....:|.|||||...:|.||||::|.::|:|||||:..        
  Rat    34 PVYS------GRIVGGQGAALGHWPWQVSLRFDSTHICGGSLISNHWVMTAAHCIKK-------- 84

  Fly    85 PIAAERFTIRAGSNDR--FSGGVLVQVAEVIVHEEYGNFLNDVALLRLESPLILSASIQPIDLPT 147
            ...:..:::..||.||  .|.|....|:.:::..::.|...|:|||:|.|.:..::.:.||.||.
  Rat    85 TWFSFLYSVWLGSIDRDYSSTGEEYYVSRIVIPSKHHNTDGDIALLKLSSRVTFTSLVLPICLPN 149

  Fly   148 ADTPADVDVI--ISGWGRIKHQGDLPRYLQYNTLKSISLERCDEL---IGWGV--------QSEL 199
            ...|..|...  ::|||: ..:|..|..||...:..|:.|.|::|   ||:.:        :..|
  Rat   150 ISKPLTVPASCWVTGWGQ-NQEGHYPSTLQELEVPIITGEACEQLYNPIGFFLPDLERIIKEDML 213

  Fly   200 CL--IHEADNGACNGDSGGP------AVYNNQVVGVAGFVWS-ACGTSYPDGYARVYYHNEWIKN 255
            |.  |.::.: :|.||||||      .|:..  :||..  |. .||.:.|..|..|.|:.:||.:
  Rat   214 CAGEIQQSKD-SCKGDSGGPLSCHIDGVWTQ--IGVIS--WGLECGKNLPGVYTNVTYYQKWISS 273

  Fly   256  255
              Rat   274  273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1304NP_608418.1 Tryp_SPc 32..256 CDD:238113 77/248 (31%)
Prss48NP_001420265.1 Tryp_SPc 40..274 CDD:238113 77/248 (31%)

Return to query results.
Submit another query.