DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1304 and LOC102554637

DIOPT Version :9

Sequence 1:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster
Sequence 2:XP_017448472.2 Gene:LOC102554637 / 102554637 RGDID:7618053 Length:246 Species:Rattus norvegicus


Alignment Length:270 Identity:76/270 - (28%)
Similarity:127/270 - (47%) Gaps:44/270 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRSVKAAILLGSFLLLLAVPVHSAPGSLNGRVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILSRN 65
            ||::...:|:|:   .:|.||..     :.::|||....::..|:|||| |:|.|.||||:::..
  Rat     1 MRALLVLVLVGA---AVAFPVDD-----DDKIVGGYTCQEHSVPYQVSL-NSGYHYCGGSLINDQ 56

  Fly    66 YVLTAAHCVTNQDSNGNSVPIAAERFTIRAG--------SNDRFSGGVLVQVAEVIVHEEYG--N 120
            :|::||||..:             |..:|.|        .:::|     |..|::|.|..:.  .
  Rat    57 WVVSAAHCYKS-------------RIQVRLGEHNINVLEGDEQF-----VNAAKIIKHPNFDRKT 103

  Fly   121 FLNDVALLRLESPLILSASIQPIDLPTADTPADVDVIISGWGRIKHQG----DLPRYLQYNTLKS 181
            ..||:.|::|.||:.|:|.:..:.||::..||....:|||||.....|    ||.:.|....|..
  Rat   104 LNNDIMLIKLSSPVKLNARVATVALPSSCAPAGTQCLISGWGNTLSFGVNDPDLLQCLDAPLLPQ 168

  Fly   182 ISLERCDELIGWGVQSELCL-IHEADNGACNGDSGGPAVYNNQVVGVAGFVWSACGTSYPDGYAR 245
            ...|.  ...|....:.:|. ..|....:|.||||||.|.|.::.|:..:.:.......|..|.:
  Rat   169 ADCEA--SYPGKITNNMVCAGFLEGGKDSCQGDSGGPVVCNGELQGIVSWGYGCALPDNPGVYTK 231

  Fly   246 VYYHNEWIKN 255
            |..:.:||::
  Rat   232 VCNYVDWIQD 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1304NP_608418.1 Tryp_SPc 31..253 CDD:214473 67/236 (28%)
Tryp_SPc 32..256 CDD:238113 69/239 (29%)
LOC102554637XP_017448472.2 Tryp_SPc 24..242 CDD:238113 69/239 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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