DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1304 and hgf

DIOPT Version :10

Sequence 1:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster
Sequence 2:XP_002933142.2 Gene:hgf / 100495840 XenbaseID:XB-GENE-999992 Length:710 Species:Xenopus tropicalis


Alignment Length:237 Identity:68/237 - (28%)
Similarity:109/237 - (45%) Gaps:36/237 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 VKNQFPHQ------VSLRNAGSHSCGGSILSRNYVLTAAHCVTNQDSNGNSVPIAAERFTIRAGS 97
            |.|..|.|      ||:|...||.|||:::..|:||||..|..:.|::       .:.:....|.
 Frog   478 VVNGIPTQTRKVWMVSVRYRNSHKCGGTLIKENWVLTARQCFLSGDND-------LKDYEAWLGV 535

  Fly    98 NDRFS----GGVLVQVAEVIVHEEYGNFLNDVALLRLESPLILSASIQPIDLPT--ADTPADVDV 156
            ::.:|    ...::.::: :||...|   :::.||:|..|..|:|.:..|.||.  ...|.:...
 Frog   536 HNIYSTTEKHKQVLNISQ-LVHGPKG---SNLVLLKLSRPATLNAYVDRIKLPNYGCTIPENTMC 596

  Fly   157 IISGWGRIKHQG--DLPRYLQYNTLKSISLERCDELIGWGV---QSELCLIHEADN-GACNGDSG 215
            .:.|||   |.|  |....||..||..:..|:|:|.....:   :||:|.:.|..| |.|..|.|
 Frog   597 SVYGWG---HTGTNDYDGQLQEGTLHIVGNEKCNEHHKGKITVNESEICAMSETANIGPCERDYG 658

  Fly   216 GPAV-YNNQVVGVAGFVWSACGTSY---PDGYARVYYHNEWI 253
            ||.: ..|:...|.|.:....|.:.   |..:.||.|:.:||
 Frog   659 GPLICEENRTHLVQGVIIPGRGCAIQKRPVIFVRVAYYAKWI 700

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1304NP_608418.1 Tryp_SPc 32..256 CDD:238113 68/237 (29%)
hgfXP_002933142.2 PAN_AP_HGF 26..109 CDD:238532
KR 113..195 CDD:214527
KR 197..275 CDD:214527
KR 288..367 CDD:214527
KR 373..454 CDD:238056
Tryp_SPc 478..703 CDD:238113 68/237 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.