DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1304 and tmprss6

DIOPT Version :10

Sequence 1:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster
Sequence 2:XP_004913946.2 Gene:tmprss6 / 100489045 XenbaseID:XB-GENE-1011573 Length:806 Species:Xenopus tropicalis


Alignment Length:243 Identity:77/243 - (31%)
Similarity:117/243 - (48%) Gaps:27/243 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILSRNYVLTAAHCVTNQDSNGNSVPIAAERFTIRA 95
            |:|||..|.:.::|.|.||:..|.|.|||::::..::||||||.|.:..      .:.|.:|:..
 Frog   570 RLVGGTQAQEGEWPWQASLQVRGEHICGGTLVADQWILTAAHCFTPESY------ASPEVWTVYL 628

  Fly    96 GSNDRFSGG----VLVQVAEVIVHEEYGNFLN--DVALLRLES--PLILSASIQPIDLP--TADT 150
            | ..|.|..    :..:|..:::|..|....:  ||||:.|:.  || .|..:|||.||  |...
 Frog   629 G-KVRLSRSTQKELAFKVIRLVIHPFYDEDSHDYDVALVLLDHLVPL-TSPHVQPICLPSSTHHF 691

  Fly   151 PADVDVIISGWGRIKHQGDLPRYLQYNTLKSISLERCDELIGWGVQSE-LCL-IHEADNGACNGD 213
            |......::|||.:|..|.....||...::.::.:.|.||..:.:... ||. ..:....||.||
 Frog   692 PTGSSCWVTGWGSVKENGPTSDVLQKVDIQLVAQDICTELYRYQISPRMLCAGYRDGSKDACQGD 756

  Fly   214 SGGPAVYNNQVVG---VAGFV-WSA-CG-TSYPDGYARVYYHNEWIKN 255
            ||.|.|... ..|   .||.| |.| || ..|...|:|:....:||::
 Frog   757 SGSPLVCKT-ASGRWFQAGLVSWGAGCGIPRYFGVYSRITRLVQWIES 803

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1304NP_608418.1 Tryp_SPc 32..256 CDD:238113 76/242 (31%)
tmprss6XP_004913946.2 SEA 77..174 CDD:460188
CUB 235..303 CDD:412131
LDLa 448..478 CDD:238060
LDLa 480..514 CDD:238060
LDLa 525..560 CDD:238060
Tryp_SPc 572..804 CDD:238113 76/241 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.