DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1304 and LOC100485189

DIOPT Version :10

Sequence 1:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster
Sequence 2:XP_002941065.2 Gene:LOC100485189 / 100485189 XenbaseID:XB-GENE-29077659 Length:249 Species:Xenopus tropicalis


Alignment Length:251 Identity:43/251 - (17%)
Similarity:78/251 - (31%) Gaps:87/251 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 IIDFSDELRPKSTQILDASKPIDGF-RPNF------LNDLDVISEDELIITHSSIRHDCRHFFNL 153
            :|.||...:|......::.:.::|. ..||      ..|..|...:....:...||         
 Frog  1765 VISFSGPKQPSQNDSANSVEVVNGMEEKNFSAEEASFRDQPVFFREFRFTSEVPIR--------- 1820

  Fly   154 VLEHQGDGRILHLKISTGTVKVLAKNLYFPNGIQLTPDKKSAIFAECSMARIKKLDLETGKIDI- 217
             |::.|.    |:.:..||:..:...|     .||          .||..::|:|....|.:.: 
 Frog  1821 -LDYHGK----HVSMDQGTLAGILIGL-----AQL----------NCSELKLKRLSYRHGLLGVD 1865

  Fly   218 --FCENLPGLPDNIRGTPRGTFWVGLAATRSKNYPSLLDRLGNWPGVRQF---FVDIVPAAHWMK 277
              |...:             |.|  |...:....|.:|..:|....:.|.   ..|:|    |:.
 Frog  1866 KLFSYAI-------------TEW--LNDIKKNQLPGILGGVGPMHSLVQLVQGLKDLV----WLP 1911

  Fly   278 ILVFSKHPHSIIVELDSNGKIIRSLH---------------DVTGKHVSDVSQVTE 318
            |..:.|           :|:|:|...               ::|.:.|..:....|
 Frog  1912 IEQYRK-----------DGRIVRGFQRGAASFGTSTAMAALELTNRMVQTIQAAAE 1956

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1304NP_608418.1 Tryp_SPc 32..256 CDD:238113 30/169 (18%)
LOC100485189XP_002941065.2 Tryp_SPc 22..243 CDD:238113
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.