DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1304 and gzm3.4

DIOPT Version :9

Sequence 1:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_001108167.1 Gene:gzm3.4 / 100001210 ZFINID:ZDB-GENE-070912-136 Length:251 Species:Danio rerio


Alignment Length:258 Identity:70/258 - (27%)
Similarity:121/258 - (46%) Gaps:31/258 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LLLLAVPVHSAPGSLNGRVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILSRNYVLTAAHCVTNQD 78
            ::|::..|....|..:| :|||.:...:..|:..||:....|:|||.::..:||||:|||.  :|
Zfish     8 IILISYSVIKTGGMESG-IVGGREVKLHSRPYMASLQVQRKHNCGGILIKEDYVLTSAHCW--KD 69

  Fly    79 SNGNSVPIAAERFTIRAGSNDRFSGGVLVQVAEVIVHEEY--GNFLNDVALLRLESPLILSASIQ 141
            :....|.:.|...:.|..|..      ::||.:.|.|..|  .|...|:.||:|::..:|:..:.
Zfish    70 TTNLEVVLGAHNISQRENSQQ------IIQVQKYIKHPNYQKKNHSFDIMLLKLKTKAVLNHFVN 128

  Fly   142 PIDLPTADTP--ADVDVIISGWGRIKHQGDLPRYLQYNTLKSISLE-----RCDELIGWGV---- 195
            ..:||..:..  |.|:..|:|||..:     |.....|.|:.::|:     .|..  .|.|    
Zfish   129 ITNLPKHEPSILAPVECSIAGWGMQR-----PGEGASNVLREVNLQLESNSYCKS--KWQVYFNS 186

  Fly   196 QSELCLIHEADNGACNGDSGGPAVYNNQVVGVAGFVW--SACGTSYPDGYARVYYHNEWIKNN 256
            ::.:|...:.....|.||||.|...|:::.|:|.:.:  :.....||:.|.:|.....|||.|
Zfish   187 KNMVCTASDGKKAFCQGDSGSPLFCNSELYGMAAYTYPNNCTFKEYPEVYMKVSAFLPWIKKN 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1304NP_608418.1 Tryp_SPc 31..253 CDD:214473 62/236 (26%)
Tryp_SPc 32..256 CDD:238113 65/238 (27%)
gzm3.4NP_001108167.1 Tryp_SPc 25..249 CDD:238113 65/238 (27%)
Tryp_SPc 25..246 CDD:214473 62/235 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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