DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser6 and TMPRSS11D

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_004253.1 Gene:TMPRSS11D / 9407 HGNCID:24059 Length:418 Species:Homo sapiens


Alignment Length:253 Identity:74/253 - (29%)
Similarity:117/253 - (46%) Gaps:44/253 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILTRTYILTAAHCVSNEDVNHVITPIAAERFTIRA 95
            |::||.:|.:..:|.|||||...:|.||||::...:|||||||                   .|:
Human   186 RILGGTEAEEGSWPWQVSLRLNNAHHCGGSLINNMWILTAAHC-------------------FRS 231

  Fly    96 GSNDR---FSGGV-------LVQVAEVIVHEEY--GNFLNDVALLRLESPLILSASIQPIDLP-- 146
            .||.|   .:.|:       .::|..:::|..|  ....||:||:|||:.:..:..|..:.||  
Human   232 NSNPRDWIATSGISTTFPKLRMRVRNILIHNNYKSATHENDIALVRLENSVTFTKDIHSVCLPAA 296

  Fly   147 TVDTPADVDVVISGWGRIKHQGDLPRYLQYNTLKSITRQQCEELIDFG---FEGELCL-LHQVDN 207
            |.:.|......::|||..::.|.....|:...::.|:...|.....:.   ..|.||. :.|...
Human   297 TQNIPPGSTAYVTGWGAQEYAGHTVPELRQGQVRIISNDVCNAPHSYNGAILSGMLCAGVPQGGV 361

  Fly   208 GACNGDSGGPAVYNNQ-----LVGVAGFVVDGCG-STYPDGYARVFYFKDWIKKHSDV 259
            .||.||||||.|..:.     :||:..: .|.|| ...|..|.||..:.|||::.:.:
Human   362 DACQGDSGGPLVQEDSRRLWFIVGIVSW-GDQCGLPDKPGVYTRVTAYLDWIRQQTGI 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 73/247 (30%)
TMPRSS11DNP_004253.1 SEA 48..146 CDD:460188
Tryp_SPc 187..415 CDD:238113 73/247 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.