DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser6 and ctrb.2

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_001038747.1 Gene:ctrb.2 / 692313 ZFINID:ZDB-GENE-060519-7 Length:263 Species:Danio rerio


Alignment Length:275 Identity:89/275 - (32%)
Similarity:128/275 - (46%) Gaps:41/275 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTFGKVAILLCSFLLFLV--LPVQSAPGKLNG--RVVGGEDAVKNQFPHQVSLRNA-GSHSCGGS 60
            |.|  |.||||..|:...  ..|.:.|..:.|  |:|.||:||.:.:|.||||::: |.|.||||
Zfish     1 MAF--VWILLCLALIGTAYGCGVPAIPPVITGYARIVNGEEAVPHSWPWQVSLQDSTGFHFCGGS 63

  Fly    61 ILTRTYILTAAHCVSNEDVNHVITPIAAERFTIRAGSNDRFSGGVLVQ---VAEVIVHEEYGNFL 122
            ::...:::|||||  |...:|          .:..|.:||.|....:|   |.:|..|..:..|.
Zfish    64 LINEWWVVTAAHC--NVRTSH----------RVILGEHDRSSNAESIQTMTVGKVFKHPNFNMFT 116

  Fly   123 --NDVALLRLESPLILSASIQPIDLPTVDT--PADVDVVISGWGRIKHQG-DLPRYLQYNTLKSI 182
              ||:.|::|.:|..::..:.|:.|...:.  |..:..|.||||..||.. |.|..||...|..:
Zfish   117 INNDILLIKLATPAKINTHVSPVCLAETNDNFPGGMKCVTSGWGLTKHNAPDTPALLQQAALPLL 181

  Fly   183 TRQQCEELIDFGFEGELCLLHQVDNGA-----CNGDSGGPAVYNNQ----LVGVAGFVVDGCGST 238
            |.:.|:.     |.|.......|..||     |.||||||.|....    |||:..:....|..:
Zfish   182 TNEDCKR-----FWGNKITDLMVCAGASGASSCMGDSGGPLVCQKDGVWTLVGIVSWGSSVCSPS 241

  Fly   239 YPDGYARVFYFKDWI 253
            .|..||||...:.|:
Zfish   242 SPGVYARVTKLRAWV 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 77/240 (32%)
ctrb.2NP_001038747.1 Tryp_SPc 34..259 CDD:238113 77/240 (32%)

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