DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser6 and CG17242

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_722787.1 Gene:CG17242 / 59226 FlyBaseID:FBgn0250841 Length:245 Species:Drosophila melanogaster


Alignment Length:254 Identity:71/254 - (27%)
Similarity:111/254 - (43%) Gaps:29/254 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLCSFLLFLVLPVQSAPGKLNGRVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILTRTYILTAAHC 73
            :|...:|.||...|.|   .:.:.:|.|.|     |.|.|::....|.|||.|.:...|||.|.|
  Fly     1 MLLKGILLLVSIAQIA---ADFKSIGIEQA-----PWQASVQINDKHHCGGVIYSEDIILTIAEC 57

  Fly    74 VSNEDVNHVITPIAAERFTIRAGSNDRFSGGVLVQVAEVIVHEEYGNFLNDVALLRLESPLILSA 138
            |....:         |..::|.||....:||.:::|.::.: :..|...:|||:|:|.|||.|..
  Fly    58 VRKARL---------EFISVRVGSAQENAGGTVLKVEKMRL-QVLGLRPSDVAILQLRSPLYLDG 112

  Fly   139 SIQPIDLPTVDTPADVDVVISGWGRIKHQGDLPRYLQYNTLKSITRQQCEELIDFGFEGELCLLH 203
            .|:.|.|.|:......:..:||||::.........|....:|...:..|  ..:...:|.|..:.
  Fly   113 GIRAIPLATIPLVPGTNASVSGWGQLSAMNPSSEVLLRVDVKIQDQLMC--ATNLALKGRLMSVG 175

  Fly   204 QVDNG-------ACNGDSGGPAVYNNQLVGVAGFVVDGCGSTYPDG-YARVFYFKDWIK 254
            ::...       ||.|..|||.|.||:|.|:..: ...|....... ||.:..||.||:
  Fly   176 EICAAPAGEIPYACQGFVGGPLVANNRLYGILSW-QSACDVLNKSSVYANIAMFKVWIE 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 65/231 (28%)
CG17242NP_722787.1 Tryp_SPc 24..235 CDD:238113 64/228 (28%)

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