DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser6 and hpn

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_001091657.2 Gene:hpn / 569259 ZFINID:ZDB-GENE-141212-373 Length:425 Species:Danio rerio


Alignment Length:283 Identity:83/283 - (29%)
Similarity:128/283 - (45%) Gaps:56/283 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GKVAILLCSFLLFLVLPVQSAPGKLNGRVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILTRTYIL 68
            |::..::|......:||.:        |:|||.||.:..:|.||||:..|.|.|||||::..:|:
Zfish   144 GQILEVICQDCGRRMLPEE--------RIVGGVDARQGSWPWQVSLQYDGVHQCGGSIISDRWII 200

  Fly    69 TAAHCVSNEDVNHVITPIAAERFTIRAGS--NDRFSGGVLV-QVAEVIVHEEYGNFLN------- 123
            :||||.. |...|      |.|:.:..||  |......|:: :|..|:.|..|..|::       
Zfish   201 SAAHCFP-ERYRH------ASRWRVLMGSIYNTPIRKNVVIAEVKTVVYHSSYLPFVDANIDDNS 258

  Fly   124 -DVALLRLESPLILSASIQPIDLPTV-DTPADVDV-VISGWGRIKHQGDLPRYLQYNTLKSITRQ 185
             |:|::.|..||..:..|||:.|||. ...||..: .::|||.:::.|.....||...:..|:..
Zfish   259 RDIAVISLTKPLQFTDYIQPVCLPTYGQRLADGQMGTVTGWGNVEYYGTQANVLQEAHVPIISDA 323

  Fly   186 QCE-----------ELIDFGFEGELCLLHQVDNGACNGDSGGPAVYNN--------QLVGVAGFV 231
            .|.           .:...|:|       :....:|.||||||.|..:        :|:||..:.
Zfish   324 VCNGPDYYDNQVTTTMFCAGYE-------KGGTDSCQGDSGGPFVAADVLSKTSRYRLLGVVSWG 381

  Fly   232 VDGCG-STYPDGYARVFYFKDWI 253
            . ||. :..|..|.||..|..||
Zfish   382 T-GCAMAKKPGVYTRVSRFLPWI 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 78/255 (31%)
hpnNP_001091657.2 Hepsin-SRCR 53..160 CDD:462736 2/15 (13%)
Tryp_SPc 164..404 CDD:238113 78/255 (31%)

Return to query results.
Submit another query.