DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser6 and st14

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:XP_685356.5 Gene:st14 / 557248 ZFINID:ZDB-GENE-140106-74 Length:841 Species:Danio rerio


Alignment Length:254 Identity:81/254 - (31%)
Similarity:122/254 - (48%) Gaps:36/254 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 PGKLNGRVVGGEDAVKNQFPHQVSLR-NAGSHSCGGSILTRTYILTAAHCVSNEDVNHVITPIAA 88
            |.|.| |:|||::|...::|.||||. ....|:||.||::..::|.||||....|.::.:|    
Zfish   597 PYKHN-RIVGGQNADVGEWPWQVSLHFKTQGHACGASIISNKWLLCAAHCFIQPDPSYKMT---- 656

  Fly    89 ERFTIRAGSNDRFSGGVLVQVAE---VIVHEEYGNFLN--DVALLRLESPLILSASIQPIDLPTV 148
            ..:...:|..|:.:....||:.:   :|.|..|.:..|  |::||.|..||..|.::.||.||..
Zfish   657 SSWITYSGLRDQNTHDKSVQMRDLKTIITHPNYNDLTNDYDISLLELSQPLNFSNTVHPICLPAT 721

  Fly   149 D--TPADVDVVISGWGRIKHQGDLPRYLQYNTLKSITRQQCEELIDFGFEGE-----LC---LLH 203
            .  ..|.....::|||.::..|...:.||...:|.|....|..:.    ||:     :|   |..
Zfish   722 SHVFTAGSSCFVTGWGTLREGGSAAQILQKAEVKVINDTVCNMVT----EGQVTSRMMCSGYLSG 782

  Fly   204 QVDNGACNGDSGGPAVYNNQLVG----VAGFVV--DGCG-STYPDGYARVFYFKDWIKK 255
            .||  ||.||||||.|..::  |    .||.|.  :||. ...|..|.||...::||::
Zfish   783 GVD--ACQGDSGGPLVCLSE--GGKWFQAGIVSWGEGCARRNKPGVYTRVTKLREWIRE 837

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 77/247 (31%)
st14XP_685356.5 SEA 78..175 CDD:460188
CUB 208..322 CDD:238001
CUB 331..437 CDD:238001
LDLa 445..477 CDD:238060
LDLa 479..513 CDD:238060
LDLa 515..549 CDD:238060
LDLa 556..591 CDD:238060
Tryp_SPc 603..838 CDD:238113 77/247 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.