DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser6 and Tpsab1

DIOPT Version :9

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_062195.2 Gene:Tpsab1 / 54271 RGDID:3066 Length:310 Species:Rattus norvegicus


Alignment Length:285 Identity:78/285 - (27%)
Similarity:131/285 - (45%) Gaps:62/285 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LLFLVLP-----VQSAPGKLNGR--VVGGEDAVKNQFPHQVSLR---NAGSHSCGGSILTRTYIL 68
            ||.|.||     |.:||.....|  :|||::|..|::|.|||||   ....|.||||::...::|
  Rat    41 LLLLTLPLLSSLVHAAPSLAMPREGIVGGQEASGNKWPWQVSLRVNDTYWMHFCGGSLIHPQWVL 105

  Fly    69 TAAHCV--SNEDVNHVITPIAAERFTIRAGSNDRFSGGVLVQVAEVIVHEEYGNFL----NDVAL 127
            ||||||  :..|.|         :..::......:....|:.|:::|.|.::  ::    .|:||
  Rat   106 TAAHCVGPNKADPN---------KLRVQLRKQYLYYHDHLLTVSQIISHPDF--YIAQDGADIAL 159

  Fly   128 LRLESPLILSASIQPIDLPTVDT--PADVDVVISGWGRIKHQGDLPR--YLQYNTLKSITRQQC- 187
            |:|.:|:.:::::..:.||....  |:.....::|||.|.:...||.  .|:...:..:..:.| 
  Rat   160 LKLTNPVNITSNVHTVSLPPASETFPSGTLCWVTGWGNINNDVSLPPPFPLEEVQVPIVENRLCD 224

  Fly   188 -----------------EELIDFGFEGELCLLHQVDNGACNGDSGGPAVYNNQLVGVAGFVV--- 232
                             ::::..|.||         :.:|.||||||.|...:...:...||   
  Rat   225 LKYHKGLNTGDNVHIVRDDMLCAGNEG---------HDSCQGDSGGPLVCKVEDTWLQAGVVSWG 280

  Fly   233 DGCGS-TYPDGYARVFYFKDWIKKH 256
            :||.. ..|..|.||.|:.|||.::
  Rat   281 EGCAQPNRPGIYTRVTYYLDWIYRY 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 31..253 CDD:214473 68/258 (26%)
Tryp_SPc 32..256 CDD:238113 69/258 (27%)
Tpsab1NP_062195.2 Tryp_SPc 66..302 CDD:214473 67/255 (26%)
Tryp_SPc 66..302 CDD:238113 67/255 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346457
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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