DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser6 and Tmprss2

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_056590.2 Gene:Tmprss2 / 50528 MGIID:1354381 Length:490 Species:Mus musculus


Alignment Length:251 Identity:84/251 - (33%)
Similarity:113/251 - (45%) Gaps:41/251 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 KLNGRVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILTRTYILTAAHCVSNEDVNHVITPIAAERF 91
            |...|:|||.:|....:|.||||...|.|.|||||:|..:|:||||||..        |:::.|:
Mouse   249 KRQSRIVGGLNASPGDWPWQVSLHVQGVHVCGGSIITPEWIVTAAHCVEE--------PLSSPRY 305

  Fly    92 -TIRAG--SNDRFSGGVLVQVAEVIVHEEYGNFL--NDVALLRLESPLILSASIQPIDLPTVDTP 151
             |..||  .......|...||.:||.|..|.:..  ||:||::|::||..:..::|:.||.....
Mouse   306 WTAFAGILRQSLMFYGSRHQVEKVISHPNYDSKTKNNDIALMKLQTPLAFNDLVKPVCLPNPGMM 370

  Fly   152 ADVD--VVISGWGRIKHQGDLPRYLQYNTLKSITRQQCEE-----------LIDFGFEGELCLLH 203
            .|:|  ..|||||....:|.....|....:..|...:|..           :|..||     |..
Mouse   371 LDLDQECWISGWGATYEKGKTSDVLNAAMVPLIEPSKCNSKYIYNNLITPAMICAGF-----LQG 430

  Fly   204 QVDNGACNGDSGGPAVYNNQLVGVAGFVVD-----GCGSTY-PDGYARVFYFKDWI 253
            .||  :|.||||||.|....  |:...:.|     ||.... |..|..|..|.|||
Mouse   431 SVD--SCQGDSGGPLVTLKN--GIWWLIGDTSWGSGCAKALRPGVYGNVTVFTDWI 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 82/246 (33%)
Tmprss2NP_056590.2 LDLa 112..147 CDD:238060
SRCR_2 152..247 CDD:464747
Tryp_SPc 254..485 CDD:238113 82/246 (33%)
Blue background indicates that the domain is not in the aligned region.

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