DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser6 and Tmprss11f

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:XP_063129928.1 Gene:Tmprss11f / 498345 RGDID:1560675 Length:489 Species:Rattus norvegicus


Alignment Length:261 Identity:80/261 - (30%)
Similarity:123/261 - (47%) Gaps:51/261 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LPVQSAPGKLNGRVVGGEDAVKNQFPHQVSLRNAGS-HSCGGSILTRTYILTAAHCV-SNEDVNH 81
            ||..|...::   |.|.|.|::.::|.|.||:..|: |.||.::::.|::||||||. .|.|.:.
  Rat   248 LPASSTTERI---VQGRETAMEGEWPWQASLQLIGAGHQCGATLISNTWLLTAAHCFWKNRDPSK 309

  Fly    82 -------VITPIAAERFTIRAGSNDRFSGGVLVQVAEVIVHEEY--GNFLNDVALLRLESPLILS 137
                   .|||...:|                 .|..:|:||||  .:..||:||.:|.|.:..|
  Rat   310 WIATFGTTITPPLVKR-----------------SVGRIIIHEEYHRDSNENDIALAQLTSRVEFS 357

  Fly   138 ASIQPIDLP--TVDTPADVDVVISGWGRIKHQGDLPRYLQYNTLKSITRQQCEE------LIDFG 194
            ..:|.:.||  ::..|....|.::|:|.|...|.....|:...:::|....|.:      ||.  
  Rat   358 NVVQRVCLPDSSMKLPPKTSVFVTGFGSIVDDGPTQNKLRQARVETIGSDVCNQKDVYDGLIT-- 420

  Fly   195 FEGELC---LLHQVDNGACNGDSGGPAVYNNQ----LVGVAGFVVDGCGSTYPDGYARVFYFKDW 252
             .|.||   :..:||  ||.||||||.||:|:    :||:..:.........|..|.||..::||
  Rat   421 -PGMLCAGFMEGKVD--ACKGDSGGPLVYDNRDIWYIVGIVSWGQSCALPNKPGVYTRVSKYRDW 482

  Fly   253 I 253
            |
  Rat   483 I 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 77/248 (31%)
Tmprss11fXP_063129928.1 None

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