DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser6 and prtn3

DIOPT Version :9

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_001006847.1 Gene:prtn3 / 448597 XenbaseID:XB-GENE-5805214 Length:245 Species:Xenopus tropicalis


Alignment Length:244 Identity:74/244 - (30%)
Similarity:119/244 - (48%) Gaps:40/244 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 GKLNGRVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILTRTYILTAAHCVSNEDVNHVITPIAAER 90
            |.::.::|||.:|..|..|:..||:..|.|.||||::...:::|||||:.|...|.|...:.|..
 Frog    20 GSMHTQIVGGREATPNSHPYIASLQLRGRHFCGGSLIAPQFLMTAAHCMENTASNLVTVVLGAHS 84

  Fly    91 FTIRAGSNDRFSGGVLVQVAEVIVHEEYGN------FLNDVALLRLESPLILSASIQPIDLPTV- 148
            ......:..||.           |::.:.|      ..||:.:|:|:.|:.|:..:|.:.||:. 
 Frog    85 LRANEATKQRFR-----------VNQVFENGFNPLTLQNDIVILKLDRPVSLNGKVQVVSLPSAN 138

  Fly   149 -DTPADVDVVISGWGRIKHQGDLPRYLQYNTLKSITRQQCEELIDFGFEGELCLLHQV------- 205
             |.||....|.:||||:..:|.:|..||...: ::|||            .||..:.:       
 Frog   139 EDVPAGTQCVTAGWGRLSTEGQIPDRLQELNV-TVTRQ------------NLCRPNNICTGVFMQ 190

  Fly   206 DNGACNGDSGGPAVYNNQLVGVAGFVVDGCGS-TYPDGYARVFYFKDWI 253
            ..|.|.||||||.|.|..:.|:..|::..||: ..||.::||..|:.:|
 Frog   191 QAGICFGDSGGPLVCNGVIQGITSFIIRSCGNGVTPDFFSRVSLFRRFI 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 31..253 CDD:214473 72/237 (30%)
Tryp_SPc 32..256 CDD:238113 73/238 (31%)
prtn3NP_001006847.1 Tryp_SPc 26..241 CDD:238113 73/238 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm47449
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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