DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser6 and Tmprss11c

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_001025468.1 Gene:Tmprss11c / 435845 MGIID:3521861 Length:431 Species:Mus musculus


Alignment Length:247 Identity:82/247 - (33%)
Similarity:121/247 - (48%) Gaps:44/247 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILTRTYILTAAHCVSNEDVNHVITPIAAERFTIRA 95
            :|.||:||.:.::|.|.||:....|.||.::::..:::|||||                 |...|
Mouse   199 KVAGGQDAEEGEWPWQASLQQNSVHRCGATLISNYWLITAAHC-----------------FIRAA 246

  Fly    96 GSND-RFSGGVLVQ-------VAEVIVHEEYG--NFLNDVALLRLESPLILSASIQPIDLP--TV 148
            ...| :.|.|.|:.       |..:|:||.|.  ...||:|::||.||::..::|:...||  |.
Mouse   247 NPKDWKVSFGFLLSKPQAPRAVKNIIIHENYSYPAHDNDIAVVRLSSPVLYESNIRRACLPEATQ 311

  Fly   149 DTPADVDVVISGWGRIKHQGDLPRYLQYNTLKSITRQQCEELIDFG---FEGELC---LLHQVDN 207
            ..|.:.|||::|||.:|..||.|..||...:|.|..:.|.....:|   ..|.:|   |..:|| 
Mouse   312 KFPPNSDVVVTGWGTLKSDGDSPNILQKGKVKIIDNKTCNSGKAYGGMITPGMMCAGFLKGRVD- 375

  Fly   208 GACNGDSGGPAVYNNQ-----LVGVAGFVVDGCG-STYPDGYARVFYFKDWI 253
             ||.||||||.|..:.     |.|:..: .|.|. ...|..|.||.|::|||
Mouse   376 -ACQGDSGGPLVSEDSKGIWFLAGIVSW-GDECALPNKPGVYTRVTYYRDWI 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 82/246 (33%)
Tmprss11cNP_001025468.1 SEA 62..161 CDD:460188
Tryp_SPc 200..428 CDD:238113 82/246 (33%)
Blue background indicates that the domain is not in the aligned region.

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