DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser6 and intr

DIOPT Version :9

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_651633.1 Gene:intr / 43397 FlyBaseID:FBgn0039599 Length:298 Species:Drosophila melanogaster


Alignment Length:209 Identity:48/209 - (22%)
Similarity:82/209 - (39%) Gaps:56/209 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 CGGSILTRTYILTAAHCVSNEDVNHVITPIAAERFTIRAGSNDRFSGGVLVQVAEVIVHEEYGNF 121
            |.|::::...:||:|.|..     ..:.......:.::|..:..:|      ||.:|.     ..
  Fly   113 CSGALISTRLVLTSALCFP-----RTLRQPPPRSYKLQASRSRIYS------VANLIT-----GA 161

  Fly   122 LNDVALLRLESPLILSASIQPIDLPTVDTPA----DVDVVISGWGRIKHQGDLPRYLQYNTLKSI 182
            :.|:|||.|.:|| ....:.||||  .::|.    :|.:.:|           .::|::...|.|
  Fly   162 IEDMALLLLHAPL-EDPFVHPIDL--CESPLRRNDNVTMYMS-----------QQHLRFLRTKLI 212

  Fly   183 TRQQC-----EELIDFGFEGELCLLHQ---VDNGACNGDSGGPAVYNNQLVGVAGFVVDGCGSTY 239
            ....|     ::...|..:..||.|:.   ||   |....|...::.::|.|     ||..|...
  Fly   213 PNSNCKRSYAQDENAFITQTMLCALNSNRLVD---CQTAKGDVLLHQDRLCG-----VDIYGQHC 269

  Fly   240 PDG------YARVF 247
            .||      ||.||
  Fly   270 SDGGVNGELYADVF 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 31..253 CDD:214473 48/209 (23%)
Tryp_SPc 32..256 CDD:238113 48/209 (23%)
intrNP_651633.1 Tryp_SPc 112..284 CDD:304450 48/209 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24276
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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