DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser6 and LPA

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_005568.2 Gene:LPA / 4018 HGNCID:6667 Length:2040 Species:Homo sapiens


Alignment Length:267 Identity:77/267 - (28%)
Similarity:122/267 - (45%) Gaps:48/267 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ILLCSFLLFLVLPVQSAPGKLNGRVVGGEDAVKNQFPHQVSLRNA-GSHSCGGSILTRTYILTAA 71
            |.||:...|.....|..|.|..|.:|||..|..:.:|.|||||.. |.|.|||::::..::||||
Human  1796 IPLCASSSFDCGKPQVEPKKCPGSIVGGCVAHPHSWPWQVSLRTRFGKHFCGGTLISPEWVLTAA 1860

  Fly    72 HCV--SNEDVNHVITPIAAERFTIRAGSNDRFSGGVLVQVAEVIVHEEYGNFLNDVALLRLESPL 134
            ||:  |:...::.:...|.:...:.:...:       ::|:.:.:.....    |:|||:|..|.
Human  1861 HCLKKSSRPSSYKVILGAHQEVNLESHVQE-------IEVSRLFLEPTQA----DIALLKLSRPA 1914

  Fly   135 ILSASIQPIDLPTVD--TPADVDVVISGWGRIKHQGDLPRYLQYNTLKSITRQQCEELIDFGFEG 197
            :::..:.|..||:.|  ..|..:..|:|||  :.||         |..:...::.:.|:   .|.
Human  1915 VITDKVMPACLPSPDYMVTARTECYITGWG--ETQG---------TFGTGLLKEAQLLV---IEN 1965

  Fly   198 ELC----------LLHQVDNGACNGDSGGPAVYNNQ----LVGVAGFVVDGCG-STYPDGYARVF 247
            |:|          |....|  :|.||||||.|...:    |.||..:.: ||. ...|..||||.
Human  1966 EVCNHYKYICAEHLARGTD--SCQGDSGGPLVCFEKDKYILQGVTSWGL-GCARPNKPGVYARVS 2027

  Fly   248 YFKDWIK 254
            .|..||:
Human  2028 RFVTWIE 2034

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 69/243 (28%)
LPANP_005568.2 Kringle 28..105 CDD:395005
Kringle 142..219 CDD:395005
Kringle 256..333 CDD:395005
Kringle 370..447 CDD:395005
Kringle 484..561 CDD:395005
Kringle 598..675 CDD:395005
Kringle 712..789 CDD:395005
Kringle 826..903 CDD:395005
KR 938..1019 CDD:214527
Kringle 1054..1131 CDD:395005
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1147..1166
KR 1166..1246 CDD:214527
KR 1272..1352 CDD:214527
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1365..1388
KR 1386..1466 CDD:214527
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1476..1497
KR 1500..1581 CDD:214527
KR 1614..1695 CDD:214527
Kringle 1720..1799 CDD:395005 1/2 (50%)
Tryp_SPc 1820..2034 CDD:238113 68/241 (28%)
Blue background indicates that the domain is not in the aligned region.

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