DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser6 and cfd

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_989320.1 Gene:cfd / 394945 XenbaseID:XB-GENE-973605 Length:265 Species:Xenopus tropicalis


Alignment Length:248 Identity:69/248 - (27%)
Similarity:119/248 - (47%) Gaps:21/248 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LVLPVQSAPGKLNGRVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILTRTYILTAAHCVSNEDVNH 81
            |||.|.:...:..||::||:|:.....|:..|::..|.|.|||.::...::|:||||.:|...:.
 Frog    12 LVLTVATYECRPRGRILGGQDSKAEVRPYMASIQQNGIHQCGGVLIADKWVLSAAHCATNSSNSS 76

  Fly    82 VITPIAAERFTIRAGSNDRFSGGVLVQVAEVIVHEEYGNFL--NDVALLRLESPLILSASIQPID 144
            :...:.|    |.....:::.  ::|:|...|.|..|.:.:  :|:.||.|...:.||.::.|:.
 Frog    77 LNVMLGA----ISLSKPEKYK--IVVKVLREIPHPLYNSTIKHHDLLLLELSEKVTLSPAVNPLP 135

  Fly   145 L--PTVDTPADVDVVISGWGRIKHQGDLPRYLQYNTLKSITRQQC--EELIDFGFEGELCLLHQV 205
            .  ..:|..|....:::|||:::..|..|..||...:..|:|..|  ....|......:....:.
 Frog   136 FQNENIDISAGKRCLVAGWGQMRLTGKKPDTLQELWVPLISRDVCNRRNYYDNEITANMICAGES 200

  Fly   206 DNGACNGDSGGPAVYNNQLVGVAGFVVDG----CGS-TYPDGYARVFYFKDWI 253
            ...:|.||||||.|.:    |:|..:|.|    ||: |.|..|..:..:|.||
 Frog   201 RKDSCEGDSGGPLVCD----GIAVAIVQGGFRKCGNPTKPGIYTLIEPYKSWI 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 63/233 (27%)
cfdNP_989320.1 Tryp_SPc 27..251 CDD:238113 63/233 (27%)

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