DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser6 and Jon65Aii

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_648014.1 Gene:Jon65Aii / 38684 FlyBaseID:FBgn0035666 Length:259 Species:Drosophila melanogaster


Alignment Length:277 Identity:81/277 - (29%)
Similarity:121/277 - (43%) Gaps:51/277 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ILLCSFLLFLVL----PVQSAP--GKLNGRVVGGEDAVKNQFPHQVSLR----NAGSHSCGGSIL 62
            :|..:|.|...|    ||:..|  .|:|||:..|..|.:.:.|:.|:||    |.|...|||||:
  Fly     7 LLFSAFALVAALERPVPVKDMPAGNKINGRITNGYPAYEGKVPYIVALRFDNGNGGGWYCGGSII 71

  Fly    63 TRTYILTAAHCVSNEDVNHVITPIAAERFTIRAGSNDRFSGGVLVQVAEVIVHEEYGNFLNDVAL 127
            ...::||||||.           ..|...||        |.|.:.:......|.:.||..||:||
  Fly    72 GHEWVLTAAHCT-----------YGASYVTI--------SYGAVWRQQPQFTHYDTGNLHNDIAL 117

  Fly   128 LRLESPLI-LSASIQPIDLPTVDTPADVD---------VVISGWGRIKHQGDLPRYLQYNTLKSI 182
            :|  :|.: ..:.:..::||..|     |         .::||||.......:..||....::..
  Fly   118 IR--TPHVDFWSLVNKVELPRYD-----DRYNNFYGWWALLSGWGSSSDSSGMTDYLNCVDIQIS 175

  Fly   183 TRQQCEELIDFGF--EGELCLLHQVDNGACNGDSGGPAVYN--NQLVGVAGF-VVDGCGSTYPDG 242
            ....|.:.....:  ...||.....:.|:|:||||||.|.:  |:.||:..| ...||.|..|.|
  Fly   176 DNSVCLDYYGSHYITSNHLCYATPENKGSCSGDSGGPLVLHDGNRQVGIVSFGSAAGCLSNSPKG 240

  Fly   243 YARVFYFKDWIKKHSDV 259
            ..||..:.|||:.|:.:
  Fly   241 LTRVTGYLDWIRDHTGI 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 69/242 (29%)
Jon65AiiNP_648014.1 Tryp_SPc 36..251 CDD:214473 68/240 (28%)

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