DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser6 and Tmprss11b

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:XP_063129516.1 Gene:Tmprss11b / 365265 RGDID:1303278 Length:420 Species:Rattus norvegicus


Alignment Length:253 Identity:80/253 - (31%)
Similarity:117/253 - (46%) Gaps:44/253 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILTRTYILTAAHCV--SNEDVNHV------ITPIA 87
            |:.||..|.|.::|.|.|||..|.|.||.|::...::||||||.  :|...|..      :||..
  Rat   188 RITGGSTAQKGEWPWQASLRVNGKHHCGASLIGERFLLTAAHCFLRTNNPKNLTVSFGTRVTPAY 252

  Fly    88 AERFTIRAGSNDRFSGGVLVQVAEVIVHEEY--GNFLNDVALLRLESPLILSASIQPIDLP--TV 148
            .:.:                 |.|||:||:|  |...:|||:::|...:.....:..:.||  |.
  Rat   253 MQHY-----------------VEEVIIHEDYVKGQHHDDVAIIKLTEKVSFRNDVHRVCLPEATQ 300

  Fly   149 DTPADVDVVISGWGRIKHQGDLPRYLQYNTLKSITRQQCEELIDFG---FEGELCLLHQ---VDN 207
            ..|....||::|||.:.:.|..|..||..::|.|....|.....:|   .:..||..:.   || 
  Rat   301 VFPPGEGVVVTGWGSLSYNGKSPLLLQKASIKIIDTNACNSEEAYGGRIMDTMLCAGYMEGYVD- 364

  Fly   208 GACNGDSGGPAVYNNQ-----LVGVAGFVVDGCGSTYPDG-YARVFYFKDWIKKHSDV 259
             ||.||||||.|:.|.     |||:..:..: ||.....| |.||..::|||...:.:
  Rat   365 -ACQGDSGGPLVHPNSRDIWYLVGIVSWGHE-CGRVNKPGVYMRVTSYRDWIASKTGI 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 79/247 (32%)
Tmprss11bXP_063129516.1 None

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