DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser6 and LOC3290331

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:XP_564960.4 Gene:LOC3290331 / 3290331 VectorBaseID:AGAMI1_006728 Length:316 Species:Anopheles gambiae


Alignment Length:267 Identity:92/267 - (34%)
Similarity:124/267 - (46%) Gaps:37/267 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 PVQSAPGKLNGRVVGGEDAVKNQFPHQVSLR---NAGSHSCGGSILTRTYILTAAHCV-SNEDVN 80
            |..:.....|.|:|.|::|...|||:||:|.   |:|...||.||:|:.|:||||||| ...|.:
Mosquito    54 PTTATQNTPNRRIVNGQEARPGQFPYQVALLGQFNSGVGLCGASIITQRYVLTAAHCVYIGVDAS 118

  Fly    81 HVITPIA-------AERFTIRAGSNDRFSGGVLVQVAEVIVHEEYGNF--LNDVALLRLESPLIL 136
               ||:|       |....|...|..|    :....:.||.|..|..|  .||:|::||:.|::.
Mosquito   119 ---TPVANGTAILGAHNRMIEEPSQQR----ITFSASGVIGHPGYDLFDVRNDIAVVRLDEPILY 176

  Fly   137 SASIQPIDLP---TVDTPADVDVVISGWG--RIKHQGDLPRYLQYNTLKSITRQQCEELIDFGFE 196
            :..||||.||   ...|.|.:...:||:|  ...:.| |...|.|.....||...|..... |||
Mosquito   177 TDRIQPIRLPGRSDTRTFAGLMGTVSGYGVYSTANPG-LSDVLNYVLNPIITNADCRAAWS-GFE 239

  Fly   197 -----GELCLLHQVDNGACNGDSGGPAVYNNQ----LVGVAGF-VVDGCGSTYPDGYARVFYFKD 251
                 ..:|........|||.|||||....:.    .|||..| ...||.:..|..:|||.|:.|
Mosquito   240 WLIEPQNVCQSGDGGRSACNSDSGGPLTVQDNGESLQVGVVSFGSAGGCDNGIPTVFARVTYYLD 304

  Fly   252 WIKKHSD 258
            ||:.:||
Mosquito   305 WIEANSD 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 87/251 (35%)
LOC3290331XP_564960.4 None

Return to query results.
Submit another query.