DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser6 and tmprss4b

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:XP_073805980.1 Gene:tmprss4b / 327651 ZFINID:ZDB-GENE-030131-5862 Length:449 Species:Danio rerio


Alignment Length:269 Identity:85/269 - (31%)
Similarity:127/269 - (47%) Gaps:46/269 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GKVAILLCSFLLFLVLPVQSAPGKLNG--RVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILTRTY 66
            |.|..:.||..           |::.|  |:|||.:.....:|.||||:....|.||||:|:.::
Zfish   200 GSVVSVSCSDC-----------GEVVGEDRIVGGVETSIEHWPWQVSLQFNHRHMCGGSLLSTSW 253

  Fly    67 ILTAAHCVSNEDVNHVITPIAAERFTIRAGSNDRFSGGVLVQVAEVIVHEEYGNFLN--DVALLR 129
            |::||||.:.....       ..|:|:..|.. :....|.|.|..:::|::|....|  |:|:|:
Zfish   254 IISAAHCFTGRTQE-------LSRWTVVLGQT-KVMDVVGVSVDMIVIHKDYNRLTNDFDIAMLK 310

  Fly   130 LESPLILSASIQPIDLPTVDTPADVDVVISGWGRIKHQGDLPRYLQYNTLKSITRQQCEE----- 189
            |..|:....||.|:.||.........:|::|||.:|..|.||..||..::..:.|.:|.:     
Zfish   311 LTWPVKTGESILPVCLPPHQLAIKDMLVVTGWGLLKEGGALPTVLQKASVPLVNRSECSKPTIYS 375

  Fly   190 ------LIDFGFEGELCLLHQVDNGACNGDSGGPAVYNN---QLVGVAGFVVDGCG-STYPDGYA 244
                  ::..||     |...||  ||.||||||.||.:   ||:|:..:.| ||. ...|..||
Zfish   376 SSITPRMLCAGF-----LQGNVD--ACQGDSGGPLVYLSSRWQLIGIVSWGV-GCAREGKPGVYA 432

  Fly   245 RVFYFKDWI 253
            .|....|||
Zfish   433 DVTQLLDWI 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 78/239 (33%)
tmprss4bXP_073805980.1 None

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