DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser6 and HPN

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_002142.1 Gene:HPN / 3249 HGNCID:5155 Length:417 Species:Homo sapiens


Alignment Length:269 Identity:88/269 - (32%)
Similarity:129/269 - (47%) Gaps:46/269 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LPVQSAPGKLNGRVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILTRTYILTAAHCVSNEDVNHVI 83
            |||.        |:|||.|....::|.|||||..|:|.||||:|:..::||||||....  |.|:
Human   158 LPVD--------RIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPER--NRVL 212

  Fly    84 TPIAAERFTIRAGSNDRFS-GGVLVQVAEVIVHEEYGNF--------LNDVALLRLESPLILSAS 139
            :     |:.:.||:..:.| .|:.:.|..|:.|..|..|        .||:||:.|.|||.|:..
Human   213 S-----RWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEY 272

  Fly   140 IQPIDLPTVDTPADVD---VVISGWGRIKHQGDLPRYLQYNTLKSITRQQCEELIDFG--FEGEL 199
            |||:.||... .|.||   ..::|||..::.|.....||...:..|:...|.....:|  .:.::
Human   273 IQPVCLPAAG-QALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKM 336

  Fly   200 CLLHQVDNG--ACNGDSGGPAVYNN--------QLVGVAGFVVDGCG-STYPDGYARVFYFKDW- 252
            ......:.|  ||.||||||.|..:        :|.|:..:.. ||. :..|..|.:|..|::| 
Human   337 FCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGT-GCALAQKPGVYTKVSDFREWI 400

  Fly   253 ---IKKHSD 258
               ||.||:
Human   401 FQAIKTHSE 409

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 82/252 (33%)