DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser6 and CG31780

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_723920.1 Gene:CG31780 / 318937 FlyBaseID:FBgn0051780 Length:464 Species:Drosophila melanogaster


Alignment Length:249 Identity:72/249 - (28%)
Similarity:110/249 - (44%) Gaps:50/249 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 AVKNQFPHQVSLRNA--GSHSCGGSILTRTYILTAAHCVSNEDVNHVITPIAAERFTIRAGSNDR 100
            |.:.:.|..|:|.:|  .|:..||:::....::||.....|         :.|.:..:|||..| 
  Fly   113 AQEAEVPWMVALLDARTSSYVAGGALIAPHVVITARQRTEN---------MTASQLVVRAGEWD- 167

  Fly   101 FS------GGVLVQVAEVIVHEEYG--NFLNDVALLRLESPLILSASIQPIDLPTVDTPADVD-- 155
            ||      ..|.|.:..::.|..:.  |..|:|||:.|...|..|..|.||.:|:  .|.:.|  
  Fly   168 FSTKTEQLPSVDVPIRSIVRHPGFNLENGANNVALVFLRRSLTSSRHINPICMPS--APKNFDFS 230

  Fly   156 -VVISGWGRIKHQGDLPRYLQYNTLKSIT-----RQQCEELI------DFGFEGEL-CLLHQVDN 207
             .:.:|||  |:..|.|.|:  |.||.|:     |:.||:.:      ||..:..| |...:...
  Fly   231 RCIFTGWG--KNSFDDPSYM--NVLKKISLPVVQRRTCEQQLRLYYGNDFELDNSLMCAGGEPGK 291

  Fly   208 GACNGDSGGP---AVYNN----QLVGVAGFVVDGCG-STYPDGYARVFYFKDWI 253
            .:|.||.|.|   |:.:|    :|.|:..|.|| || ...|..|..|....:||
  Fly   292 DSCEGDGGSPLACAIKDNPQRYELAGIVNFGVD-CGLPGVPAVYTNVANVIEWI 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 72/249 (29%)
CG31780NP_723920.1 Tryp_SPc 113..344 CDD:214473 70/247 (28%)

Return to query results.
Submit another query.