DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser6 and Tmprss11e

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_001406557.1 Gene:Tmprss11e / 305265 RGDID:1561698 Length:423 Species:Rattus norvegicus


Alignment Length:257 Identity:73/257 - (28%)
Similarity:124/257 - (48%) Gaps:52/257 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILTRTYILTAAHCV-SNEDVNHVITPIAAERFTIR 94
            |:|||..|.:.::|.|.||:..|||.||.::::.|::::||||. :::|         ..|:|..
  Rat   191 RIVGGTSAEEGEWPWQSSLQWDGSHRCGATLISNTWLVSAAHCFRTHKD---------PSRWTAS 246

  Fly    95 AGSN---DRFSGGVLVQVAEVIVHEEYGNFLN---DVALLRLESPLILSASIQPIDLPTVD---T 150
            .|:.   .:.:.|    :..:||||:| |:.:   |:||:.|..|:..:.::..:.||..:   .
  Rat   247 FGATLQPPKLTTG----IRRIIVHEKY-NYPSHDYDIALVELSRPVPCTNAVHKVCLPDANHEFQ 306

  Fly   151 PADVDVVISGWGRIKHQGDLPRYLQYNTLKSITRQQCE-----------ELIDFGF-EGELCLLH 203
            |.. .:.::|:|.:::.|....||:...:..|..|.|.           .::..|| :||     
  Rat   307 PGQ-RMFVTGFGALRNDGFAQNYLRQVQVDYIDTQTCNRPQSYNGAITPRMLCAGFLKGE----- 365

  Fly   204 QVDNGACNGDSGGPAVYNN-----QLVGVAGFVVDGCGS-TYPDGYARVFYFKDWIKKHSDV 259
               ..||.||||||.|..:     .|.||..: .|.||. ..|..|.||..|:|||..::.:
  Rat   366 ---KDACQGDSGGPLVTPDVRDVWYLAGVVSW-GDECGQPNKPGVYTRVTAFRDWITSNTGI 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 72/251 (29%)
Tmprss11eNP_001406557.1 SEA 50..146 CDD:460188
Tryp_SPc 192..420 CDD:238113 72/251 (29%)
Blue background indicates that the domain is not in the aligned region.

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