DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser6 and Tpsg1

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_001426649.1 Gene:Tpsg1 / 302990 RGDID:631355 Length:320 Species:Rattus norvegicus


Alignment Length:279 Identity:89/279 - (31%)
Similarity:129/279 - (46%) Gaps:49/279 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 CSFLLFLVLP------VQSAPGK-----LNGRVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILTR 64
            |.|||.|.:|      :||..|:     ...|:|||..|....:|.|.|||....|.||||:|:.
  Rat     7 CGFLLLLAVPGISCEALQSGCGQPQVSHAGSRIVGGHAAQAGAWPWQASLRLQKVHVCGGSLLSP 71

  Fly    65 TYILTAAHCVSNEDVNHVITPIAAERFTIRAGSNDRFSGGVLVQVAEVIVHEEY----GNFLNDV 125
            .::||||||.|. .||.....:.....||..  :..||     .|.::|::...    |: ..|:
  Rat    72 EWVLTAAHCFSG-SVNSSDYEVHLGELTITL--SPHFS-----TVKQIIMYSSAPGPPGS-SGDI 127

  Fly   126 ALLRLESPLILSASIQPIDLP--TVDTPADVDVVISGWGRIKHQGDL--PRYLQYNTLKSITRQQ 186
            ||::|.:|:.||:.:||:.||  :.|....:...::|||..:....|  |..||...:..:..:.
  Rat   128 ALVQLATPVALSSQVQPVCLPEASADFHPGMQCWVTGWGYTQEGEPLKPPYNLQEAKVSVVDVET 192

  Fly   187 CEE--------LIDFGFEGELCLLHQVDNGACNGDSGGPAVYNNQLVGV---AGFVV--DGCG-S 237
            |.:        ||.   ...||.....|  ||..|||||.|.  ::.|:   ||.|.  :||| .
  Rat   193 CSQAYSSSNGSLIQ---SDMLCAWGPGD--ACQDDSGGPLVC--RVAGIWQQAGVVSWGEGCGRP 250

  Fly   238 TYPDGYARVFYFKDWIKKH 256
            ..|..||||..:.:||.:|
  Rat   251 DRPGVYARVTAYVNWIHRH 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 78/245 (32%)
Tpsg1NP_001426649.1 None

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