DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser6 and Tpsb2

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_062053.2 Gene:Tpsb2 / 29268 RGDID:3065 Length:274 Species:Rattus norvegicus


Alignment Length:277 Identity:87/277 - (31%)
Similarity:129/277 - (46%) Gaps:38/277 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LCSFLLFLVLP-----VQSAPGKLNGRV--VGGEDAVKNQFPHQVSLRNAGS---HSCGGSILTR 64
            :...||.|.|.     |.:||..:..||  |||.:|.::::|.|||||...|   |.||||::..
  Rat     1 MLKLLLLLALSPLASLVHAAPCPVKQRVGIVGGREASESKWPWQVSLRFKFSFWMHFCGGSLIHP 65

  Fly    65 TYILTAAHCVSNEDVNHVITPIAAERFTIRAGSNDRFSGGVLVQVAEVIVHEEYGNFLN--DVAL 127
            .::|||||||.    .|:.:|   |.|.::......:....|:.|...:||..|....:  |:||
  Rat    66 QWVLTAAHCVG----LHIKSP---ELFRVQLREQYLYYADQLLTVNRTVVHPHYYTVEDGADIAL 123

  Fly   128 LRLESPLILSASIQPIDLPTVDT--PADVDVVISGWGRI-KHQGDLPRY-LQYNTLKSITRQQCE 188
            |.||:|:.:|..|.|..||....  |:.....::|||.| ..:..||.| |:...:..:....|:
  Rat   124 LELENPVNVSTHIHPTSLPPASETFPSGTSCWVTGWGDIDSDEPLLPPYPLKQVKVPIVENSLCD 188

  Fly   189 ELIDFGF----------EGELCLLHQVDNGACNGDSGGPAVYNNQLVGVAGFVV---DGCG-STY 239
            .....|.          :|.|| .....:.:|.||||||.|...:...:...||   :||. :..
  Rat   189 RKYHTGLYTGDDVPIVQDGMLC-AGNTRSDSCQGDSGGPLVCKVKGTWLQAGVVSWGEGCAEANR 252

  Fly   240 PDGYARVFYFKDWIKKH 256
            |..|.||.|:.|||.::
  Rat   253 PGIYTRVTYYLDWIHRY 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 79/248 (32%)
Tpsb2NP_062053.2 Tryp_SPc 30..268 CDD:238113 78/245 (32%)

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