DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser6 and Gzmm

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:XP_063119183.1 Gene:Gzmm / 29252 RGDID:620022 Length:266 Species:Rattus norvegicus


Alignment Length:182 Identity:57/182 - (31%)
Similarity:93/182 - (51%) Gaps:14/182 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SFLLFLVLPVQSAPG-KLNGRVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILTRTYILTAAHCVS 75
            |.||.|.|....|.| :...:::||.:||.:..|:.|||:|..||.|||.::.:.::||||||:|
  Rat     6 SLLLLLALKTLWAVGNRFEAQIIGGREAVPHSRPYMVSLQNTKSHVCGGVLVHQKWVLTAAHCLS 70

  Fly    76 NEDVNHVITPIAAERFTIRAGS-NDRFSGGVLVQVAEVIVHEEYG-NFLNDVALLRLESPLILSA 138
            .        |:...:......| :|....|:...:.:.|.|..|. .:.||:|||:|:..:..|.
  Rat    71 E--------PLQQLKLVFGLHSLHDPQDPGLTFYIKQAIKHPGYNLKYENDLALLKLDGRVKPSK 127

  Fly   139 SIQPIDLPTV--DTPADVD-VVISGWGRIKHQGDLPRYLQYNTLKSITRQQC 187
            :::|:.||..  |.||:.. ...:|||....:|.|.:.||...|:.:..:.|
  Rat   128 NVKPLALPRKPRDKPAEGSRCSTAGWGITHQRGQLAKSLQELDLRLLDTRMC 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 50/161 (31%)
GzmmXP_063119183.1 None

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