DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser6 and F10

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_058839.1 Gene:F10 / 29243 RGDID:61850 Length:482 Species:Rattus norvegicus


Alignment Length:244 Identity:71/244 - (29%)
Similarity:113/244 - (46%) Gaps:31/244 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RVVGGEDAVKNQFPHQVSLRNAGSHS--CGGSILTRTYILTAAHCVSNEDVNHVITPIAAERFTI 93
            |:|||::..:.:.|.|..|.:.....  |||:||...||||||||:..           |:||.:
  Rat   231 RIVGGQECKRGECPWQALLFSDEETDGFCGGTILNEFYILTAAHCLHQ-----------AKRFKV 284

  Fly    94 RAG--SNDRFSGGVLVQVAEVIV-HEEY--GNFLNDVALLRLESPLILSASIQPIDLPTVDTPAD 153
            |.|  :.::..||.:|...::|: |.::  ..:..|:|:|||::|:....::.|..||..|. |:
  Rat   285 RVGDLNTEQEDGGEMVHEVDMIIKHNKFQRDTYDFDIAMLRLKTPITFRENVAPACLPQKDW-AE 348

  Fly   154 VDV------VISGWGRIKHQGDLPRYLQYNTLKSITRQQCEELIDFGF-EGELCLLHQV-DNGAC 210
            ..:      ::||:||...:|...:.|:...:..:.|..|.....|.. :...|..:.. ...||
  Rat   349 ATLMTQKTGIVSGFGRTHEKGRQSKVLKMMEVPYVDRNTCRLSTSFSITQNMFCAGYDAKQEDAC 413

  Fly   211 NGDSGGPAVYN-NQLVGVAGFVV--DGCGSTYPDG-YARVFYFKDWIKK 255
            .||||||.|.. .....|.|.|.  :||......| |.:|..|..||.:
  Rat   414 QGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDR 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 70/243 (29%)
F10NP_058839.1 GLA 23..84 CDD:214503
EGF_CA 86..122 CDD:238011
FXa_inhibition 129..164 CDD:464251
Tryp_SPc 232..462 CDD:238113 70/241 (29%)
Blue background indicates that the domain is not in the aligned region.

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