DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser6 and F11

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_001398595.1 Gene:F11 / 290757 RGDID:1309364 Length:622 Species:Rattus norvegicus


Alignment Length:261 Identity:77/261 - (29%)
Similarity:120/261 - (45%) Gaps:62/261 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 KLNGRVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILTRTYILTAAHCVSNEDVNHVITPIAAERF 91
            |:..||.||..:|..::|.||:|.....|.|||||:...:|||||||.|..:....:        
  Rat   383 KIRPRVFGGAASVHGEWPWQVTLHTTQGHLCGGSIIGNRWILTAAHCFSGTETPKTL-------- 439

  Fly    92 TIRAGSNDRFSGGVLVQ-----------VAEVIVHEEYGNFLN--DVALLRLESPLILSASIQPI 143
                    |..||::.|           |.|:|:|::|.:..:  |:|||:||..:..:...:||
  Rat   440 --------RVYGGIVNQSEINEDTTFFRVQEMIIHDQYTSAESGFDIALLKLEPAMNYTDFQRPI 496

  Fly   144 DLPTVDTPADVDVV-----ISGWGRIKHQGDLPRYLQYNTLKSITRQQCE----------ELIDF 193
            .||   :..|.:||     ::|||..|.:.::...||...:..::.::|:          ::|..
  Rat   497 CLP---SKGDRNVVHTECWVTGWGYTKSRDEVQSTLQKAKVPLVSNEECQTRYRKHKITNKVICA 558

  Fly   194 GF-EGELCLLHQVDNGACNGDSGGP--AVYNN--QLVGVAGFVVDGCG-STYPDGYARVFYFKDW 252
            |: ||        ....|.||||||  ..:|.  .|||:..: .:||| ...|..|..|..:.||
  Rat   559 GYKEG--------GKDTCKGDSGGPLSCKHNGVWHLVGITSW-GEGCGQKERPGVYTNVAKYVDW 614

  Fly   253 I 253
            |
  Rat   615 I 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 75/256 (29%)
F11NP_001398595.1 APPLE 20..103 CDD:128519
APPLE 110..193 CDD:128519
APPLE 200..283 CDD:128519
APPLE 291..374 CDD:128519
Tryp_SPc 388..615 CDD:238113 73/254 (29%)
Blue background indicates that the domain is not in the aligned region.

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