DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser6 and Tmprss11g

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_001008554.1 Gene:Tmprss11g / 289546 RGDID:1306446 Length:417 Species:Rattus norvegicus


Alignment Length:247 Identity:75/247 - (30%)
Similarity:127/247 - (51%) Gaps:32/247 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILTRTYILTAAHCVSNEDVNHVITPIAAERFTIRA 95
            |:..|:.|..|.:|.|.||:..|.|.||.|::...:::|:|||..|..     .|   :.:|:..
  Rat   185 RIADGKPAGSNSWPWQSSLQVEGIHLCGASLIGSQWLVTSAHCFDNYK-----NP---KLWTVSF 241

  Fly    96 GSNDRFSGGVLV--QVAEVIVHEEYG--NFLNDVALLRLESPLILSASIQPIDLP--TVDTPADV 154
            |   |..|..|.  :|..:|:||.|.  ...:|:|:::|.||::.|.:::.:.||  |.......
  Rat   242 G---RTLGNPLTTRKVESIIIHENYAAHKHDDDIAVVKLSSPVLFSENLRTVCLPEATFQVLPKS 303

  Fly   155 DVVISGWGRIKHQGDLPRYLQYNTLKSITRQQCEELIDFG---FEGELC---LLHQVDNGACNGD 213
            .|.::|||.:|..|..|..||...::.|:...|.::..:|   ..|.:|   |..::|  ||.||
  Rat   304 KVFVTGWGALKANGPFPNSLQEVEIEIISNDVCNQVNVYGGAISSGMICAGFLTGKLD--ACEGD 366

  Fly   214 SGGPAVYNNQ-----LVGVAGFVVDGCGSTYPDG-YARVFYFKDWIKKHSDV 259
            ||||.|.::.     |:|:..:.:| ||.....| |.||.::::|||..:::
  Rat   367 SGGPLVISDNRNKWYLLGIVSWGID-CGKENKPGIYTRVTHYRNWIKSKTNI 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 74/241 (31%)
Tmprss11gNP_001008554.1 SEA 48..146 CDD:460188
Tryp_SPc 185..411 CDD:214473 72/239 (30%)
Blue background indicates that the domain is not in the aligned region.

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