DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser6 and Prss34

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_001099242.1 Gene:Prss34 / 287140 RGDID:1306667 Length:316 Species:Rattus norvegicus


Alignment Length:286 Identity:82/286 - (28%)
Similarity:131/286 - (45%) Gaps:62/286 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FLLFLVLPVQSAPGKL---NGR----VVGGEDAVKNQFPHQVSLR------NAGSHSCGGSILTR 64
            :.|||.||...:...|   :|:    :|||.....::||.|||||      :...|.||||::..
  Rat     7 WFLFLTLPCLGSTMPLTPDSGQELVGIVGGCPVSASRFPWQVSLRFYNMKLSKWEHICGGSLIHP 71

  Fly    65 TYILTAAHCVSNEDVNHVITPIAAERFTIRAGSNDRFSGGVLVQVAEVIVHEEYGNFLN-----D 124
            .::|||||||..:::.       |..|.::.|....:....|::||::|.|.::...|:     |
  Rat    72 QWVLTAAHCVELKEME-------ASCFRVQVGQLRLYENDQLMKVAKIIRHPKFSEKLSAPGGAD 129

  Fly   125 VALLRLESPLILSASIQPIDLPTVDTPADVDVV--ISGWGRIKHQGDLP---------------- 171
            :|||:|:|.::||..:.|:.||...........  ::|||.|:....||                
  Rat   130 IALLKLDSTVVLSERVHPVSLPAASQRISSKKTWWVAGWGVIEGHRPLPPPCHLREVAVPIVGNS 194

  Fly   172 ----RYLQYNTLKSITRQQCEELIDFGFEGELCLLHQVDNGACNGDSGGPAV--YNNQ--LVGVA 228
                :|..|::|...|:...::::..|.||         ..:|..|||||.|  :|..  .|||.
  Rat   195 DCEQKYRTYSSLDRTTKIIKDDMLCAGMEG---------RDSCQADSGGPLVCRWNCSWVQVGVV 250

  Fly   229 GFVVDGCG-STYPDGYARVFYFKDWI 253
            .:.: ||| ..:|..|.||..:..||
  Rat   251 SWGI-GCGLPDFPGVYTRVMSYLSWI 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 75/260 (29%)
Prss34NP_001099242.1 Tryp_SPc 33..276 CDD:238113 75/260 (29%)

Return to query results.
Submit another query.