DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser6 and Klkb1

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_036857.2 Gene:Klkb1 / 25048 RGDID:67382 Length:638 Species:Rattus norvegicus


Alignment Length:276 Identity:83/276 - (30%)
Similarity:134/276 - (48%) Gaps:59/276 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SFLLFLVLPVQSAPGKLNGRVVGGEDAVKNQFPHQVSLR---NAGSHSCGGSILTRTYILTAAHC 73
            |..|..|:.......|:|.|:|||.::...::|.||||:   .:.:|.|||||:.|.:|||||||
  Rat   371 SLRLCKVVESSDCTTKINARIVGGTNSSLGEWPWQVSLQVKLVSQNHMCGGSIIGRQWILTAAHC 435

  Fly    74 ---VSNEDVNHVITPIAAERFTIRAGSNDRFSGGVL-----------VQVAEVIVHEEY----GN 120
               :...||                   .|..||:|           ..:.|:|:|::|    |:
  Rat   436 FDGIPYPDV-------------------WRIYGGILNLSEITNKTPFSSIKELIIHQKYKMSEGS 481

  Fly   121 FLNDVALLRLESPLILSASIQPIDLPTVDTPADVDVV-----ISGWGRIKHQGDLPRYLQYNTLK 180
            :  |:||::|::||..:...:||.||   :.||.:.:     ::|||..|.:|:....||..|:.
  Rat   482 Y--DIALIKLQTPLNYTEFQKPICLP---SKADTNTIYTNCWVTGWGYTKERGETQNILQKATIP 541

  Fly   181 SITRQQCEELI-DFGFEGELCLLHQVDNG--ACNGDSGGPAVYNN----QLVGVAGFVVDGCG-S 237
            .:..::|::.. |:....::......:.|  ||.||||||.|..:    ||||:..: .:||. .
  Rat   542 LVPNEECQKKYRDYVITKQMICAGYKEGGIDACKGDSGGPLVCKHSGRWQLVGITSW-GEGCARK 605

  Fly   238 TYPDGYARVFYFKDWI 253
            ..|..|.:|..:.|||
  Rat   606 EQPGVYTKVAEYIDWI 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 77/256 (30%)
Klkb1NP_036857.2 APPLE 21..104 CDD:128519
APPLE 111..194 CDD:128519
APPLE 201..284 CDD:128519
APPLE 292..375 CDD:128519 1/3 (33%)
Tryp_SPc 391..621 CDD:238113 75/254 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.