DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser6 and F12

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_000496.2 Gene:F12 / 2161 HGNCID:3530 Length:615 Species:Homo sapiens


Alignment Length:256 Identity:76/256 - (29%)
Similarity:118/256 - (46%) Gaps:43/256 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RVVGGEDAVKNQFPHQVSLRNAGSHS-CGGSILTRTYILTAAHCVSNEDVNHVITPIAAERFTIR 94
            |||||..|::...|:..:|  ...|| |.||::...::||||||:.:..        |.|..|:.
Human   372 RVVGGLVALRGAHPYIAAL--YWGHSFCAGSLIAPCWVLTAAHCLQDRP--------APEDLTVV 426

  Fly    95 AGSNDRFSGGVLVQ---VAEVIVHEEYG--NFLNDVALLRLE-----SPLILSASIQPIDLPT-V 148
            .|...|.......|   |....:||.:.  ::.:|:|||||:     |..:||..:||:.||: .
Human   427 LGQERRNHSCEPCQTLAVRSYRLHEAFSPVSYQHDLALLRLQEDADGSCALLSPYVQPVCLPSGA 491

  Fly   149 DTPADVDVV-ISGWGRIKHQ----GDLPRYLQYNTLKSITRQQCEELIDFG---FEGELCL-LHQ 204
            ..|::..:. ::|||   ||    .:...:||...:..::.::|......|   ..|.||. ..:
Human   492 ARPSETTLCQVAGWG---HQFEGAEEYASFLQEAQVPFLSLERCSAPDVHGSSILPGMLCAGFLE 553

  Fly   205 VDNGACNGDSGGPAVYNNQ-------LVGVAGFVVDGCGS-TYPDGYARVFYFKDWIKKHS 257
            ....||.||||||.|..:|       |.|:..: ..|||. ..|..|..|.|:..||::|:
Human   554 GGTDACQGDSGGPLVCEDQAAERRLTLQGIISW-GSGCGDRNKPGVYTDVAYYLAWIREHT 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 74/252 (29%)
F12NP_000496.2 FN2 41..88 CDD:128373
EGF_CA 96..131 CDD:238011
FN1 133..173 CDD:238018
EGF 178..206 CDD:394967
Kringle 217..295 CDD:395005
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 298..359
Tryp_SPc 373..612 CDD:238113 74/252 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.