DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser6 and Tmprss4

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_663378.1 Gene:Tmprss4 / 214523 MGIID:2384877 Length:435 Species:Mus musculus


Alignment Length:245 Identity:86/245 - (35%)
Similarity:121/245 - (49%) Gaps:41/245 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILTRTYILTAAHCVSNE-DVNHVITPIAAERFTIR 94
            |||||.:|..:.:|.|||::....|.||||||...:|||||||.... ||:         .:.:|
Mouse   202 RVVGGVEAPVDSWPWQVSIQYNKQHVCGGSILDPHWILTAAHCFRKYLDVS---------SWKVR 257

  Fly    95 AGSNDRFSGGVLVQVAEVIVHEEYGNFL----NDVALLRLESPLILSASIQPIDLPTVD---TPA 152
            |||| .......:.||::.:.|.  |.|    .|:||::|:.||..|.|::||.||..|   .||
Mouse   258 AGSN-ILGNSPSLPVAKIFIAEP--NPLYPKEKDIALVKLQMPLTFSGSVRPICLPFSDEVLVPA 319

  Fly   153 DVDVVISGWGRIKHQG----DLPRYLQYNTLKSITRQQCEELIDFGFEGE-----LCL-LHQVDN 207
             ..|.:.|||..:..|    |:........:.| ||...|:    .:|||     ||. ..|...
Mouse   320 -TPVWVIGWGFTEENGGKMSDMLLQASVQVIDS-TRCNAED----AYEGEVTAEMLCAGTPQGGK 378

  Fly   208 GACNGDSGGPAVYNN---QLVGVAGFVVDGCGS-TYPDGYARVFYFKDWI 253
            ..|.||||||.:|::   |:||:..: ..|||. :.|..|.:|..:.:||
Mouse   379 DTCQGDSGGPLMYHSDKWQVVGIVSW-GHGCGGPSTPGVYTKVTAYLNWI 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 85/244 (35%)
Tmprss4NP_663378.1 LDLa 56..90 CDD:238060
SRCR_2 106..195 CDD:470597
Tryp_SPc 202..427 CDD:214473 84/243 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.