DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser6 and Tmprss3

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_001157248.1 Gene:Tmprss3 / 140765 MGIID:2155445 Length:475 Species:Mus musculus


Alignment Length:271 Identity:93/271 - (34%)
Similarity:123/271 - (45%) Gaps:41/271 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 TFGKVAILLCSFLLFLVLPVQSAPGKLNG---RVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILT 63
            |.|.|..|.|           ||.|...|   |:|||..:...|:|.||||:..|.|.|||||:|
Mouse   217 TSGHVVTLKC-----------SACGTRTGYSPRIVGGNMSSLTQWPWQVSLQFQGYHLCGGSIIT 270

  Fly    64 RTYILTAAHCVSNEDVNHVITPIAAERFTIRAGSNDRFSGGVLVQVAE-VIVHEEY--GNFLNDV 125
            ..:|:||||||  .|:.|      .:.:|::.|........|...:.| :|.|.:|  ....||:
Mouse   271 PLWIVTAAHCV--YDLYH------PKSWTVQVGLVSLMDSPVPSHLVEKIIYHSKYKPKRLGNDI 327

  Fly   126 ALLRLESPLILSASIQPIDLPTVDT--PADVDVVISGWGRIKHQGDLPRYLQYNTLKSITRQQCE 188
            ||::|..||....:||||.||..:.  |.......||||..:..||....|.:..:..|:.:.|.
Mouse   328 ALMKLSEPLTFDETIQPICLPNSEENFPDGKLCWTSGWGATEDGGDASPVLNHAAVPLISNKICN 392

  Fly   189 ELIDFG---FEGELC---LLHQVDNGACNGDSGGPAVYNN----QLVGVAGFVVDGCGSTYPDG- 242
            ....:|   ....||   |...||  :|.||||||.|...    :|||...|.: ||......| 
Mouse   393 HRDVYGGIISPSMLCAGYLKGGVD--SCQGDSGGPLVCQERRLWKLVGATSFGI-GCAEVNKPGV 454

  Fly   243 YARVFYFKDWI 253
            |.|:..|.|||
Mouse   455 YTRITSFLDWI 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 83/238 (35%)
Tmprss3NP_001157248.1 LDLa 96..129 CDD:238060
SRCR_2 134..233 CDD:464747 8/26 (31%)
Tryp_SPc 239..468 CDD:238113 83/238 (35%)
Blue background indicates that the domain is not in the aligned region.

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