DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser6 and LOC1276349

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:XP_315686.2 Gene:LOC1276349 / 1276349 VectorBaseID:AGAMI1_001951 Length:301 Species:Anopheles gambiae


Alignment Length:262 Identity:89/262 - (33%)
Similarity:122/262 - (46%) Gaps:54/262 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RVVGGEDAVKNQFPHQVSLRN---AGSHSCGGSILTRTYILTAAHCVSNEDVNHVITPIAAERFT 92
            ||..|::|...|||:|::|.:   ..|..||||:||..:||||||||..      ...|.|...|
Mosquito    55 RVTNGQEATPGQFPYQIALVSEFVITSGLCGGSVLTNNFILTAAHCVVG------TAGILASGGT 113

  Fly    93 IRAGSND-----------RFSGGVLVQVAEVIVHEEY--GNFLNDVALLRLESPLILSASIQPID 144
            ...|:::           ||||      ..||.|..|  .|..||:||:||::|::.:..:||:.
Mosquito   114 AIIGAHNRNTAEASQQRIRFSG------PGVIPHPFYASSNLRNDIALVRLDAPIVFNDRVQPVR 172

  Fly   145 LPTVDTPADVDV--------VISGWGRIKHQGDLPR-YLQYNTLKSITRQQC-----EELIDFGF 195
            |     ||..|.        .:||:||......... .:.:.|...:|...|     ..||:   
Mosquito   173 L-----PARSDTRQFGGFLGTVSGFGRTSDASTATSDVVMFTTNPVMTNADCIAQWNSALIE--- 229

  Fly   196 EGELCLLHQVDNGACNGDSGGP-AVYN--NQLVGVAGF-VVDGCGSTYPDGYARVFYFKDWIKKH 256
            ..::||..:....||||||||| ||.:  :..|||..| ...||....|..||||.:|.|||..:
Mosquito   230 PQQVCLSGEGGRSACNGDSGGPLAVQDGGSLQVGVVSFGSAGGCSIGMPSVYARVSFFLDWIVAN 294

  Fly   257 SD 258
            ||
Mosquito   295 SD 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 86/257 (33%)
LOC1276349XP_315686.2 None

Return to query results.
Submit another query.