DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser6 and LOC1274900

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:XP_314093.3 Gene:LOC1274900 / 1274900 VectorBaseID:AGAMI1_011798 Length:272 Species:Anopheles gambiae


Alignment Length:242 Identity:82/242 - (33%)
Similarity:126/242 - (52%) Gaps:30/242 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 VVGGEDAVKNQFPHQVSLRNAGSHSCGGSILTRTYILTAAHCVSNEDVNHVITPIAAERFT---I 93
            :|.|.||.:|..|:||||:..|:.:|.|||:...:||||.|||.       :....:||..   :
Mosquito    34 IVDGSDAEENAAPYQVSLQIDGNSTCSGSIVGDRWILTAEHCVP-------LLQFFSERSNNTRV 91

  Fly    94 RAGSNDRFSGGVLVQV---------AEVIVHEEYGNF-LNDVALLRLESPLILSASIQPIDLPTV 148
            .||:||...||....:         :.::||:...|| .||:||:||.:||..:..::.|:....
Mosquito    92 VAGTNDLKKGGTPYFIDRFFNYDNCSTMLVHKIMFNFPPNDIALIRLTTPLKFNERVKKIEFTAE 156

  Fly   149 DTPADVDVVISGWGRIKHQGDLPRYLQYNTLKSITRQQC-----EELIDFGFEGELCLLHQVDNG 208
            ..|.:..:.::|||.::: |.:|..||.....||...:|     |.|::   .|.:|.|.:...|
Mosquito   157 TVPENATLTLTGWGEMRN-GTIPTKLQTINAPSIGIDRCRAIYNEILVN---NGTICSLSKRGEG 217

  Fly   209 ACNGDSGGPAVYNNQLVGVAGFV-VDGCGSTYPDGYARVFYFKDWIK 254
            ||.||||||..:..:|||:...| ..|||..:||.:..|.|:.:|||
Mosquito   218 ACMGDSGGPVTWKGKLVGIFKAVHKKGCGEGFPDVHTNVAYYYEWIK 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 82/242 (34%)
LOC1274900XP_314093.3 None

Return to query results.
Submit another query.