DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser6 and LOC108648818

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:XP_017952796.2 Gene:LOC108648818 / 108648818 XenbaseID:XB-GENE-29091263 Length:928 Species:Xenopus tropicalis


Alignment Length:253 Identity:80/253 - (31%)
Similarity:131/253 - (51%) Gaps:27/253 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 QSAPGKLNGRVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILTRTYILTAAHCVSNEDVNHVITPI 86
            :..|..|..::|||.:||...:|.|.:|  ..::.||.|:::.|:::|||||:...|.|      
 Frog   688 KGGPSALEDKIVGGTNAVLGSWPWQAAL--VSNYLCGASLISNTWLVTAAHCIVTNDPN------ 744

  Fly    87 AAERFTIRAGSNDRFSGGVLVQVAEVIVHEEY--GNFLNDVALLRLESPLILSASIQPIDLPTVD 149
               .:|:|.|:...:|.....::.::|:||.|  .....|:|||:|.:|:..::.||.:.||...
 Frog   745 ---SYTVRLGTLYWYSTINRFKLQQIIIHENYTSATMGYDIALLKLATPVTFTSYIQSVCLPEAS 806

  Fly   150 T--PADVDVVISGWGRIKHQGDLPRYLQYNTLKSITRQQCEELIDFGF---EGELCLLHQVDN-G 208
            :  |.:....|:|||.:.:.|.:...||...::.|:.:.|...:.:|.   ...||..:...| .
 Frog   807 SSFPDNSSCYITGWGTLSYGGSVSNILQEAQVEIISTKLCSSSLMYGSTIKPSMLCAGYVNGNID 871

  Fly   209 ACNGDSGGPAVYNNQ------LVGVAGFVVDGCGSTY-PDGYARVFYFKDWIKKHSDV 259
            :|.||||||.||.|.      |||:..| .|||...| |..||||.|.::|||:.:.:
 Frog   872 SCQGDSGGPLVYRNSSDSSWYLVGIISF-GDGCAQAYRPGVYARVTYLRNWIKEKTGI 928

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 78/238 (33%)
LOC108648818XP_017952796.2 Tryp_SPc 698..925 CDD:238113 78/238 (33%)

Return to query results.
Submit another query.