DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser6 and LOC102554637

DIOPT Version :9

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:XP_017448472.2 Gene:LOC102554637 / 102554637 RGDID:7618053 Length:246 Species:Rattus norvegicus


Alignment Length:272 Identity:81/272 - (29%)
Similarity:123/272 - (45%) Gaps:66/272 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LLFLVL-------PVQSAPGKLNGRVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILTRTYILTAA 71
            ||.|||       ||..     :.::|||....::..|:|||| |:|.|.||||::...::::||
  Rat     4 LLVLVLVGAAVAFPVDD-----DDKIVGGYTCQEHSVPYQVSL-NSGYHYCGGSLINDQWVVSAA 62

  Fly    72 HCVSNEDVNHVITPIAAERFTIRAG--------SNDRFSGGVLVQVAEVIVHEEYG--NFLNDVA 126
            ||..:             |..:|.|        .:::|     |..|::|.|..:.  ...||:.
  Rat    63 HCYKS-------------RIQVRLGEHNINVLEGDEQF-----VNAAKIIKHPNFDRKTLNNDIM 109

  Fly   127 LLRLESPLILSASIQPIDLPTVDTPADVDVVISGWGRIKHQG-DLPRYLQYNTLKSITRQQCE-- 188
            |::|.||:.|:|.:..:.||:...||....:|||||.....| :.|..||......:.:..||  
  Rat   110 LIKLSSPVKLNARVATVALPSSCAPAGTQCLISGWGNTLSFGVNDPDLLQCLDAPLLPQADCEAS 174

  Fly   189 -------ELIDFGF-EGELCLLHQVDNGACNGDSGGPAVYNNQLVGVAGFVVDGCGSTYPDG--- 242
                   .::..|| ||        ...:|.||||||.|.|.:|.|:..:   |.|...||.   
  Rat   175 YPGKITNNMVCAGFLEG--------GKDSCQGDSGGPVVCNGELQGIVSW---GYGCALPDNPGV 228

  Fly   243 YARVFYFKDWIK 254
            |.:|..:.|||:
  Rat   229 YTKVCNYVDWIQ 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 31..253 CDD:214473 72/245 (29%)
Tryp_SPc 32..256 CDD:238113 74/247 (30%)
LOC102554637XP_017448472.2 Tryp_SPc 24..242 CDD:238113 74/247 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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