DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser6 and Tpsab1

DIOPT Version :9

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_112464.4 Gene:Tpsab1 / 100503895 MGIID:96943 Length:273 Species:Mus musculus


Alignment Length:280 Identity:83/280 - (29%)
Similarity:132/280 - (47%) Gaps:58/280 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LLFLVLP-----VQSAPGKLNGR--VVGGEDAVKNQFPHQVSLRNAGS---HSCGGSILTRTYIL 68
            ||.|.||     |.:|||....|  :|||::|..|::|.|||||...:   |.||||::...::|
Mouse     4 LLLLTLPLLSSLVHAAPGPAMTREGIVGGQEAHGNKWPWQVSLRANDTYWMHFCGGSLIHPQWVL 68

  Fly    69 TAAHCVSNE--DVNHVITPIAAERFTIRAGSNDRFSGGVLVQVAEVIVHEEYGNFLN--DVALLR 129
            ||||||..:  |.|.|...:..:..         :....|:.|:::|.|.::....:  |:|||:
Mouse    69 TAAHCVGPDVADPNKVRVQLRKQYL---------YYHDHLMTVSQIITHPDFYIVQDGADIALLK 124

  Fly   130 LESPLILSASIQPIDLPTVDT--PADVDVVISGWGRIKHQGDLP-----RYLQYNTLKS------ 181
            |.:|:.:|..:.|:.||....  |:.....::|||.|.:..:||     :.:|...:::      
Mouse   125 LTNPVNISDYVHPVPLPPASETFPSGTLCWVTGWGNIDNGVNLPPPFPLKEVQVPIIENHLCDLK 189

  Fly   182 -----ITRQQC----EELIDFGFEGELCLLHQVDNGACNGDSGGPAVYNNQLVGVAGFVV---DG 234
                 ||....    ::::..|.||         :.:|.||||||.|...:...:...||   :|
Mouse   190 YHKGLITGDNVHIVRDDMLCAGNEG---------HDSCQGDSGGPLVCKVEDTWLQAGVVSWGEG 245

  Fly   235 CGS-TYPDGYARVFYFKDWI 253
            |.. ..|..|.||.|:.|||
Mouse   246 CAQPNRPGIYTRVTYYLDWI 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 31..253 CDD:214473 72/256 (28%)
Tryp_SPc 32..256 CDD:238113 73/255 (29%)
Tpsab1NP_112464.4 Tryp_SPc 29..266 CDD:238113 73/255 (29%)
Tryp_SPc 29..265 CDD:214473 71/253 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842960
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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