DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ser6 and LOC100497505

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:XP_002940490.1 Gene:LOC100497505 / 100497505 XenbaseID:XB-GENE-29083711 Length:308 Species:Xenopus tropicalis


Alignment Length:307 Identity:81/307 - (26%)
Similarity:118/307 - (38%) Gaps:70/307 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ILLCSFLLFLVLPVQSA----------------PGKLN---------GRVVGGEDAVKNQFPHQV 47
            ||...|.|..||.|..|                ||...         ||:|.|.:.....:|.||
 Frog     2 ILKDLFFLPFVLSVAQATLPQHRIYPKFLHLDWPGDCGVSFFQQNTAGRIVSGNEVRPYSWPWQV 66

  Fly    48 SL--RNAGS----HSCGGSILTRTYILTAAHCVSN---EDVNHVITPIAAERFTIRAGS---NDR 100
            ||  |..|.    |.|||:::.:::|||||||...   ||         |..:.|..|.   |..
 Frog    67 SLQVRPRGGKKYVHVCGGTLIHKSWILTAAHCFQKGKAED---------AANWRIVVGKHNLNRT 122

  Fly   101 FSGGVLVQVAEVIVHEEYG----NFLN-DVALLRLESPLILSASIQPIDLPTVDT---PADVDVV 157
            .:...:..|..:..||.:.    |.|: |:||::....:|.:..|....||..:.   |... ..
 Frog   123 EATEKVYSVKRIYRHERFSYPQLNDLDYDIALVKPAEDIITTHFIHYACLPKKEMAMHPGHF-CW 186

  Fly   158 ISGWGRIK-HQGD--LPRYLQYNTLKSITRQQCEELIDFG---FEGELCLLHQVDNG---ACNGD 213
            ::|||..: .||:  |...|....|..|..:.|.....:|   .|..:|...:...|   ||.||
 Frog   187 VTGWGDTRGGQGNVTLSEVLNQARLPIIDTKTCRHKKFWGDRIRESMICAGFRNVGGPPAACQGD 251

  Fly   214 SGGPAVYNN-----QLVGVAGFVVDGCG-STYPDGYARVFYFKDWIK 254
            ||||.|..:     ::.|:..|...||. ...|..:.:...:..||:
 Frog   252 SGGPLVCQDGRGRWEVHGIVSFGPVGCTVENKPSVFTKTSTYIPWIE 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 69/258 (27%)
LOC100497505XP_002940490.1 Tryp_SPc 51..300 CDD:238113 69/258 (27%)

Return to query results.
Submit another query.