DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser6 and hgf

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:XP_002933142.2 Gene:hgf / 100495840 XenbaseID:XB-GENE-999992 Length:710 Species:Xenopus tropicalis


Alignment Length:251 Identity:67/251 - (26%)
Similarity:103/251 - (41%) Gaps:60/251 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 VKNQFPHQ------VSLRNAGSHSCGGSILTRTYILTAAHCVSNED-----------VNHVITPI 86
            |.|..|.|      ||:|...||.|||:::...::|||..|..:.|           |:::.:..
 Frog   478 VVNGIPTQTRKVWMVSVRYRNSHKCGGTLIKENWVLTARQCFLSGDNDLKDYEAWLGVHNIYSTT 542

  Fly    87 AAERFTIRAGSNDRFSGGVLVQVAEV--IVHEEYGNFLNDVALLRLESPLILSASIQPIDLPT-- 147
            ...:                 ||..:  :||...|   :::.||:|..|..|:|.:..|.||.  
 Frog   543 EKHK-----------------QVLNISQLVHGPKG---SNLVLLKLSRPATLNAYVDRIKLPNYG 587

  Fly   148 VDTPADVDVVISGWGRIKHQG--DLPRYLQYNTLKSITRQQCEE------LIDFGFEGELCLLHQ 204
            ...|.:....:.|||   |.|  |....||..||..:..::|.|      .::   |.|:|.:.:
 Frog   588 CTIPENTMCSVYGWG---HTGTNDYDGQLQEGTLHIVGNEKCNEHHKGKITVN---ESEICAMSE 646

  Fly   205 VDN-GACNGDSGGPAV-YNNQLVGVAGFVVDGCGSTY---PDGYARVFYFKDWIKK 255
            ..| |.|..|.|||.: ..|:...|.|.::.|.|...   |..:.||.|:..||.|
 Frog   647 TANIGPCERDYGGPLICEENRTHLVQGVIIPGRGCAIQKRPVIFVRVAYYAKWIHK 702

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 67/251 (27%)
hgfXP_002933142.2 PAN_AP_HGF 26..109 CDD:238532
KR 113..195 CDD:214527
KR 197..275 CDD:214527
KR 288..367 CDD:214527
KR 373..454 CDD:238056
Tryp_SPc 478..703 CDD:238113 67/251 (27%)
Blue background indicates that the domain is not in the aligned region.

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