DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser6 and f12

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:XP_017947702.2 Gene:f12 / 100493769 XenbaseID:XB-GENE-1004811 Length:597 Species:Xenopus tropicalis


Alignment Length:265 Identity:84/265 - (31%)
Similarity:130/265 - (49%) Gaps:41/265 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LPV------QSAPGKLNGRVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILTRTYILTAAHCVSNE 77
            |||      |..| .:..|:|||..|:....|:..:| ...:|.||||:::..:|:|||||:...
 Frog   341 LPVDCGRKFQKTP-SIMPRIVGGLVALPASHPYIAAL-YIDNHFCGGSLISPCWIVTAAHCLDQR 403

  Fly    78 -DVNHVITPIAAERFTIRAGSNDRFSGGVLVQVAEVIVHEE-YGNFL-NDVALLRLESPLILSAS 139
             :|..:...:...||    .:.|:.:..:||:  :.|:||: ||:.| :|:||::::|...|.||
 Frog   404 PNVTKISVVLGQSRF----NTTDQHTVTLLVE--KYILHEKYYGDTLQHDIALVKVKSINGLCAS 462

  Fly   140 -----IQPIDLPTVDTPAD--VDVVISGWGRIKHQG--DLPRYLQYNTLKSITRQQCEELIDFG- 194
                 :|||.||.....|:  ...|::|||. :::|  ....:||..::..|...||:.....| 
 Frog   463 EFSQFVQPICLPQQFKMAESTKQCVVAGWGH-QYEGAEHYAFFLQEASMPIIPYTQCQSPSVHGD 526

  Fly   195 --FEGELC---LLHQVDNGACNGDSGGPAVY----NNQLVGVAGFVVDGCG-STYPDGYARVFYF 249
              ..|.||   :...||  ||.||||||.|.    ..:|.||..: ..||. ...|..|..|..:
 Frog   527 RMLPGMLCAGFMEGGVD--ACQGDSGGPLVCEVDGRIELHGVVSW-GSGCAEENKPGVYTAVTSY 588

  Fly   250 KDWIK 254
            .|||:
 Frog   589 TDWIR 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 78/246 (32%)
f12XP_017947702.2 FN2 40..87 CDD:238019
EGF_CA 95..129 CDD:238011
KR 213..298 CDD:214527
Tryp_SPc 359..595 CDD:238113 78/246 (32%)
Blue background indicates that the domain is not in the aligned region.

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