DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser6 and LOC100491119

DIOPT Version :10

Sequence 1:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster
Sequence 2:XP_004916446.1 Gene:LOC100491119 / 100491119 XenbaseID:XB-GENE-29080535 Length:512 Species:Xenopus tropicalis


Alignment Length:240 Identity:77/240 - (32%)
Similarity:113/240 - (47%) Gaps:29/240 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILTRTYILTAAHCVSNEDVNHVITPIAAERFTIRA 95
            |:|||.|:...::|.|||||..|.|.|||||::..::::||||..   :|..:|   ..|:.|.|
 Frog   274 RIVGGTDSSLGKWPWQVSLRWDGRHMCGGSIISSQWVMSAAHCFV---LNGFLT---VSRWKIHA 332

  Fly    96 GSNDRFSGGVLVQVAEVIVHEEYGNFLN--DVALLRLESPLILSASIQPIDLPTVDTPADV--DV 156
            ||.. .|.|:...|..:..:..|....|  |||||:...|:..|.:.:|:.||.......|  :.
 Frog   333 GSIS-LSTGIAYSVRNIYYNGLYSLETNDYDVALLKTTVPMSFSDTTRPVCLPRAYQQFQVTANC 396

  Fly   157 VISGWGRIKHQGDLPRYLQYNTLKSITRQQCEELIDFGFEGE-----LCLLH---QVDNGACNGD 213
            .|.|||.:...|.|...||...::.|:.|.|..  ...:.|:     ||..:   :.|  :|.||
 Frog   397 WIIGWGHVSEGGQLSPVLQEAKVQLISSQICNH--SSNYAGQISPRMLCAGYPDGRAD--SCQGD 457

  Fly   214 SGGPAVYNN----QLVGVAGFVVDGCG-STYPDGYARVFYFKDWI 253
            ||||.|...    ..||:..: .:||| ...|..|..:....||:
 Frog   458 SGGPLVCQEGGLWWQVGIVSW-GEGCGRPNRPGVYTNLTEVLDWV 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 76/239 (32%)
LOC100491119XP_004916446.1 SRCR_2 172..269 CDD:470597
Tryp_SPc 275..501 CDD:238113 75/237 (32%)
Blue background indicates that the domain is not in the aligned region.

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